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L2_039_121G1_scaffold_210

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_210_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..720
DNA (720bp) protein (240aa)
Permease of ABC transporter for sugars n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3W3_BIFLO
permease of ABC transporter for sugars
Permease of ABC transporter for sugars {ECO:0000313|EMBL:AAN25427.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_039_121G1_scaffold_210_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

936..3191
DNA (2256bp) protein (752aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW61_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:ADH01117.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
hypothetical protein
L2_039_121G1_scaffold_210_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3220..4299
DNA (1080bp) protein (360aa)
Aminoglycoside phosphotransferase n=2 Tax=Bifidobacterium longum RepID=D6ZW60_BIFLJ
mucin desulfatase
Desulfatase {ECO:0000313|EMBL:KFI73667.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_039_121G1_scaffold_210_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4346..5893
DNA (1548bp) protein (516aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
galT2; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3W0_BIFLO
L2_039_121G1_scaffold_210_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5962..6984
DNA (1023bp) protein (341aa)
GalE1 n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MX85_9BIFI
UDP-galactose-4-epimerase {ECO:0000313|EMBL:KEY21486.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
UDP-glucose 4-epimerase
L2_039_121G1_scaffold_210_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7032..7727)
DNA (696bp) protein (232aa)
Response regulator of two-component system n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3V8_BIFLO
response regulator of two-component system
Transcriptional regulator {ECO:0000313|EMBL:KEY26272.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_039_121G1_scaffold_210_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7724..8971)
DNA (1248bp) protein (416aa)
Putative signal transduction histidine kinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN74_BIFLS
Putative signal transduction histidine kinase {ECO:0000313|EMBL:KFI73671.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
signal transduction histidine kinase
L2_039_121G1_scaffold_210_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9763..10836
DNA (1074bp) protein (358aa)
Phage shock protein C, PspC n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW55_BIFLJ
phage shock protein C
Phage shock protein C, PspC {ECO:0000313|EMBL:ADH01112.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_039_121G1_scaffold_210_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10866..11555
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW54_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH01110.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_039_121G1_scaffold_210_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11643..13244
DNA (1602bp) protein (534aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase n=2 Tax=Bifidobacterium longum RepID=B3DQI0_BIFLD
dppX2; dipeptidyl aminopeptidase/acylaminoacyl-peptidase
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase {ECO:0000313|EMBL:BAP84209.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_039_121G1_scaffold_210_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13352..13984)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQI1_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KFI73675.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_121G1_scaffold_210_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14060..16513)
DNA (2454bp) protein (818aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW51_BIFLJ
Tetratricopeptide repeat-containing protein {ECO:0000313|EMBL:KFI73676.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_121G1_scaffold_210_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16600..17790)
DNA (1191bp) protein (397aa)
Arabinose efflux permease n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DC05_BIFLN
Arabinose efflux permease {ECO:0000313|EMBL:KFI73677.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Arabinose efflux permease
L2_039_121G1_scaffold_210_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18290..19972
DNA (1683bp) protein (561aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Lysine--tRNA ligase n=3 Tax=Bifidobacterium longum subsp. longum RepID=F8ASK7_BIFLN
lysU; lysu
L2_039_121G1_scaffold_210_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20035..21000
DNA (966bp) protein (322aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW48_BIFLJ
1,4-dihydroxy-2-naphthoate octaprenyltransferase
L2_039_121G1_scaffold_210_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21060..21800
DNA (741bp) protein (247aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=21 Tax=Bifidobacterium RepID=GPMA_BIFLD
phosphoglyceromutase
L2_039_121G1_scaffold_210_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22160..22834)
DNA (675bp) protein (225aa)
Phosphate-specific transport system accessory protein PhoU n=4 Tax=Bifidobacterium RepID=D6DC01_BIFLN
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_039_121G1_scaffold_210_18
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23034..24218
DNA (1185bp) protein (395aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Histidine kinase n=2 Tax=Bifidobacterium RepID=D6ZW45_BIFLJ
histidine kinase
L2_039_121G1_scaffold_210_19
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24225..24485)
DNA (261bp) protein (87aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B7GUR4_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV37775.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_039_121G1_scaffold_210_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24610..25752)
DNA (1143bp) protein (381aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Phosphoserine aminotransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW43_BIFLJ
putative phosphoserine aminotransferase
L2_039_121G1_scaffold_210_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26145..27101
DNA (957bp) protein (319aa)
CHAP domain containing protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW42_BIFLJ
CHAP domain containing protein
CHAP domain containing protein {ECO:0000313|EMBL:ADH01098.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_039_121G1_scaffold_210_22
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27415..28059
DNA (645bp) protein (215aa)
NlpC/P60 family protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XX52_9BIFI
NlpC/P60 family protein {ECO:0000313|EMBL:EFV37772.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_039_121G1_scaffold_210_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28214..28948
DNA (735bp) protein (245aa)
NlpC/P60 family protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XX51_9BIFI
NlpC/P60 family protein {ECO:0000313|EMBL:KFI73687.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
NLP/P60 protein
L2_039_121G1_scaffold_210_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29117..30154
DNA (1038bp) protein (346aa)
Universal stress protein n=17 Tax=Bifidobacterium RepID=B3DQJ4_BIFLD
Universal stress family protein {ECO:0000313|EMBL:KFI73688.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_121G1_scaffold_210_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30225..30638)
DNA (414bp) protein (138aa)
OsmC family protein n=20 Tax=Bifidobacterium RepID=B7GUQ8_BIFLS
OsmC-like protein {ECO:0000313|EMBL:KFI73689.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_121G1_scaffold_210_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30766..31638
DNA (873bp) protein (291aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Thymidylate synthase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GVD6_BIFLN
thymidylate synthase
L2_039_121G1_scaffold_210_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31741..32403
DNA (663bp) protein (221aa)
Dihydrofolate reductase {ECO:0000313|EMBL:KFI73691.1}; EC=1.5.1.3 {ECO:0000313|EMBL:KFI73691.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Dihydrofolate reductase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MMZ2_BIFLS
dihydrofolate reductase
L2_039_121G1_scaffold_210_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32527..33045
DNA (519bp) protein (173aa)
Protein-tyrosine-phosphatase n=18 Tax=Bifidobacterium RepID=B3DQJ8_BIFLD
phosphatase
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:AIW44205.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_039_121G1_scaffold_210_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33200..33532)
DNA (333bp) protein (111aa)
Predicted branched-chain amino acid permeases (Azaleucine resistance) n=18 Tax=Bifidobacterium RepID=D6DBY9_BIFLN
Branched-chain amino acid permease {ECO:0000313|EMBL:KFI73693.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
branched-chain amino acid transport protein
L2_039_121G1_scaffold_210_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33529..34326)
DNA (798bp) protein (266aa)
Branched-chain amino acid transport protein n=1 Tax=Bifidobacterium longum E18 RepID=V6Y2L4_BIFLN
Branched-chain amino acid transport protein {ECO:0000313|EMBL:ESV34129.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
azlC; azlc
Displaying items 1-30 of 52 in total

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