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L2_039_121G1_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_233_1
unknown

Not on your lists

comp(221..376)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_039_121G1_scaffold_233_2
Acinetobacter towneri, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(430..570)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Acinetobacter towneri DSM 14962 = CIP 107472 RepID=N9B9T0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENV70387.1}; TaxID=1120929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter towneri DSM 14962 = CIP 107472.;"
hypothetical protein
L2_039_121G1_scaffold_233_3
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

708..914
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A904_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ20809.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Helix-turn-helix.
L2_039_121G1_scaffold_233_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(968..1318)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FT10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80857.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_039_121G1_scaffold_233_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1325..1663)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80472.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_039_121G1_scaffold_233_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1632..2357)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23959.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_039_121G1_scaffold_233_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2472..4283)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23958.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_039_121G1_scaffold_233_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4285..4419)
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23957.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_039_121G1_scaffold_233_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4606..6057)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23956.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative uncharacterized domain protein
L2_039_121G1_scaffold_233_10
unknown

Not on your lists

comp(6061..6426)
DNA (366bp) protein (122aa)

This feature has no annotations

L2_039_121G1_scaffold_233_11
unknown

Not on your lists

6772..7275
DNA (504bp) protein (168aa)

This feature has no annotations

L2_039_121G1_scaffold_233_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7329..9869)
DNA (2541bp) protein (847aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EEA80442.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EEA80442.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=2 Tax=Clostridium RepID=B6FU19_9CLOT
L2_039_121G1_scaffold_233_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10116..11495)
DNA (1380bp) protein (460aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QPT7_9CLOT
L2_039_121G1_scaffold_233_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11597..12361)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23951.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transposase
L2_039_121G1_scaffold_233_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12469..13857)
DNA (1389bp) protein (463aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Glycine--tRNA ligase n=2 Tax=Clostridium RepID=B6FU22_9CLOT
glycyl-tRNA synthetase
L2_039_121G1_scaffold_233_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13944..14693)
DNA (750bp) protein (250aa)
DNA repair protein RecO n=1 Tax=Clostridium nexile CAG:348 RepID=R6PT70_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA repair protein RecO
L2_039_121G1_scaffold_233_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14638..14826)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80447.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_039_121G1_scaffold_233_18
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14931..15830)
DNA (900bp) protein (300aa)
GTPase Era n=1 Tax=Clostridium nexile CAG:348 RepID=R6QPT0_9CLOT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
GTP-binding protein Era
L2_039_121G1_scaffold_233_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15896..18820)
DNA (2925bp) protein (975aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PZN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23946.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted Zn-dependent peptidases, insulinase-like
L2_039_121G1_scaffold_233_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18934..20532)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PK90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23945.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
transporter, NhaC family (TC 2.A.35)
L2_039_121G1_scaffold_233_21
unknown

Not on your lists

comp(20478..20702)
DNA (225bp) protein (75aa)

This feature has no annotations

L2_039_121G1_scaffold_233_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20880..21875)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80451.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
oligopeptide/dipeptide ABC transporter ATPase subunit
L2_039_121G1_scaffold_233_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21878..22900)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80452.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
oligopeptide/dipeptide ABC transporter ATPase subunit
L2_039_121G1_scaffold_233_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22900..23796)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6QPS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23942.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
binding-protein-dependent transport systems inner membrane component
L2_039_121G1_scaffold_233_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23810..24760)
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PZN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23941.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
binding-protein-dependent transport systems inner membrane component
L2_039_121G1_scaffold_233_26
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24825..26393)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23940.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
family 5 extracellular solute-binding protein
L2_039_121G1_scaffold_233_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26519..27070)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80456.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Chorismate mutase type II./ACT domain.
L2_039_121G1_scaffold_233_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27160..30696)
DNA (3537bp) protein (1179aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PHW1_9CLOT
L2_039_121G1_scaffold_233_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31225..31536)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FU36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23937.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_039_121G1_scaffold_233_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31617..32480)
DNA (864bp) protein (288aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU37_9CLOT
Displaying items 1-30 of 59 in total

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