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L2_039_121G1_scaffold_246

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_246_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..3907)
DNA (3906bp) protein (1302aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31618.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_121G1_scaffold_246_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4129..6768
DNA (2640bp) protein (880aa)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRT8_9FIRM
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EHM48167.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_039_121G1_scaffold_246_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6928..7506)
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF53968.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_121G1_scaffold_246_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7610..8884)
DNA (1275bp) protein (425aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF53969.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_121G1_scaffold_246_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8948..9385)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53970.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_121G1_scaffold_246_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9403..10326)
DNA (924bp) protein (308aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YLJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI65793.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_039_121G1_scaffold_246_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10369..10884)
DNA (516bp) protein (172aa)
Sigma-70 region 2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLJ9_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EHM54742.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ECF subfamily RNA polymerase sigma factor
L2_039_121G1_scaffold_246_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10985..11713)
DNA (729bp) protein (243aa)
Nitroreductase family protein n=3 Tax=Clostridiales RepID=G9YLK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31875.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
nitroreductase
L2_039_121G1_scaffold_246_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11740..12594
DNA (855bp) protein (285aa)
Pseudouridine synthase n=2 Tax=Clostridiales RepID=H1CGL9_9FIRM
RluA family pseudouridine synthase {ECO:0000313|EMBL:EHO31874.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
pseudouridine synthase
L2_039_121G1_scaffold_246_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12591..13601)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53975.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_121G1_scaffold_246_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13676..14719)
DNA (1044bp) protein (348aa)
DNA-binding helix-turn-helix protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53976.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
DNA-binding protein
L2_039_121G1_scaffold_246_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14928..15992)
DNA (1065bp) protein (355aa)
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=2 Tax=Clostridiales RepID=H1CGL6_9FIRM
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EHO31871.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_121G1_scaffold_246_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16202..18196
DNA (1995bp) protein (665aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31870.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative hydrolase
L2_039_121G1_scaffold_246_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18202..18939
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53979.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_121G1_scaffold_246_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18974..19420
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=3 Tax=Clostridiales RepID=G9YMM3_9FIRM
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rplI; 50S ribosomal protein L9
L2_039_121G1_scaffold_246_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19582..20934
DNA (1353bp) protein (451aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGL2_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:EHO31867.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_121G1_scaffold_246_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21012..22382
DNA (1371bp) protein (457aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
tilS; tRNA(Ile)-lysidine synthetase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=2 Tax=Clostridiales RepID=G9YMM1_9FIRM
L2_039_121G1_scaffold_246_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22392..22949
DNA (558bp) protein (186aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=3 Tax=Clostridiales RepID=G9YMM0_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EHO31865.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_121G1_scaffold_246_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22997..24943
DNA (1947bp) protein (649aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ftsH; cell division protein FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Clostridiales RepID=G9YML9_9FIRM
L2_039_121G1_scaffold_246_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24930..25439
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31862.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
macro domain-containing protein
L2_039_121G1_scaffold_246_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25590..26219
DNA (630bp) protein (210aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CN41_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ERI68711.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
N-acetylmuramoyl-L-alanine amidase
L2_039_121G1_scaffold_246_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26286..26411
DNA (126bp) protein (42aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YML6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31860.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_121G1_scaffold_246_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26473..27090)
DNA (618bp) protein (206aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ARY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53988.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_121G1_scaffold_246_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27155..27922)
DNA (768bp) protein (256aa)
Hydrolase, TatD family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B9T0_9CLOT
Hydrolase, TatD family {ECO:0000313|EMBL:ERI68593.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative deoxyribonuclease
L2_039_121G1_scaffold_246_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28021..29385)
DNA (1365bp) protein (455aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGK2_9FIRM
histidine kinase
L2_039_121G1_scaffold_246_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29382..30047)
DNA (666bp) protein (222aa)
Subtilin biosynthesis regulatory protein SpaR n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YML1_9FIRM
Subtilin biosynthesis regulatory protein SpaR {ECO:0000313|EMBL:EHM54004.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
multidrug ABC transporter
L2_039_121G1_scaffold_246_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30058..30912)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31855.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TraX protein.
L2_039_121G1_scaffold_246_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31153..32337
DNA (1185bp) protein (395aa)
Transporter, CPA2 family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ASN2_9CLOT
Transporter, CPA2 family {ECO:0000313|EMBL:ERI62403.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
cdu2; Na(+)/H(+) antiporter
L2_039_121G1_scaffold_246_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32399..34450)
DNA (2052bp) protein (684aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BXD2_9CLOT
L2_039_121G1_scaffold_246_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34440..35261)
DNA (822bp) protein (274aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YNU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31851.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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