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L2_039_121G1_scaffold_323

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_323_1
unknown

Not on your lists

708..827
DNA (120bp) protein (40aa)

This feature has no annotations

L2_039_121G1_scaffold_323_2
unknown

Not on your lists

841..1098
DNA (258bp) protein (86aa)

This feature has no annotations

L2_039_121G1_scaffold_323_3
unknown

Not on your lists

1095..1211
DNA (117bp) protein (39aa)

This feature has no annotations

L2_039_121G1_scaffold_323_4
unknown

Not on your lists

1717..2043
DNA (327bp) protein (109aa)

This feature has no annotations

L2_039_121G1_scaffold_323_5
unknown

Not on your lists

2125..2313
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A8Z1_BIFAD
L2_039_121G1_scaffold_323_6
unknown

Not on your lists

2261..2668
DNA (408bp) protein (136aa)

This feature has no annotations

L2_039_121G1_scaffold_323_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3519..3809)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSJ3_9BIFI
CRISPR-associated protein Cas2
L2_039_121G1_scaffold_323_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3877..4908)
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSJ4_9BIFI
CRISPR-associated protein Cas1
L2_039_121G1_scaffold_323_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4908..5585)
DNA (678bp) protein (226aa)
CRISPR-associated protein Cas4 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSJ5_9BIFI
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:KEF28021.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
CRISPR-associated protein Cas4
L2_039_121G1_scaffold_323_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5619..6464)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSJ6_9BIFI
CRISPR-associated protein {ECO:0000313|EMBL:KEF28020.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
CRISPR-associated protein
L2_039_121G1_scaffold_323_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6524..8401)
DNA (1878bp) protein (626aa)
Putative CRISPR-associated protein, Csd1 family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSJ7_9BIFI
CRISPR-associated protein {ECO:0000313|EMBL:KEF28019.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
CRISPR-associated protein
L2_039_121G1_scaffold_323_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8405..9112)
DNA (708bp) protein (236aa)
CRISPR-associated protein Cas5, Dvulg subtype n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSJ8_9BIFI
CRISPR-associated protein Cas5
CRISPR-associated protein {ECO:0000313|EMBL:BAR04040.1}; CRISPR-associated protein Cas5, Dvulg subtype {ECO:0000313|EMBL:EEG71148.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_039_121G1_scaffold_323_13
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9355..11772)
DNA (2418bp) protein (806aa)
CRISPR-associated helicase Cas3 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSJ9_9BIFI
CRISPR-associated protein Cas3
CRISPR-associated protein Cas3 {ECO:0000313|EMBL:AIZ14979.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_039_121G1_scaffold_323_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12344..15658)
DNA (3315bp) protein (1105aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ileS; isoleucine--tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=3 Tax=Bifidobacterium RepID=C0BSK1_9BIFI
L2_039_121G1_scaffold_323_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16084..17532)
DNA (1449bp) protein (483aa)
Glycoside/pentoside/hexuronide transporter n=2 Tax=Bifidobacterium RepID=C0BSK2_9BIFI
Sodium:solute symporter {ECO:0000313|EMBL:KEF28016.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
galactoside symporter
L2_039_121G1_scaffold_323_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17851..18861)
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSK3_9BIFI
Transcriptional regulator {ECO:0000313|EMBL:BAR04045.1}; Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEG71153.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
LacI family transcriptional regulator
L2_039_121G1_scaffold_323_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19238..21295)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PYI7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14787.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter
L2_039_121G1_scaffold_323_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21309..23120)
DNA (1812bp) protein (604aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSK7_9BIFI
ABC transporter {ECO:0000313|EMBL:KEF28012.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter
L2_039_121G1_scaffold_323_19
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23161..23883)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NU78_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14790.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
MarR family transcriptional regulator
L2_039_121G1_scaffold_323_20
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24037..26283)
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8B2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14791.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
beta-glucosidase
L2_039_121G1_scaffold_323_21
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26540..27118
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PYJ2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14792.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
TetR-type transcriptional regulator
L2_039_121G1_scaffold_323_22
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27174..28349
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NRI8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14793.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glxK; glycerate kinase
L2_039_121G1_scaffold_323_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28324..29640)
DNA (1317bp) protein (439aa)
MFS-type transporter n=2 Tax=Bifidobacterium dentium RepID=D2Q798_BIFDB
Transporter {ECO:0000313|EMBL:KEF28007.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
transporter
L2_039_121G1_scaffold_323_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29814..32486)
DNA (2673bp) protein (891aa)
Alpha-L-rhamnosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q797_BIFDB
Alpha-L-rhamnosidase {ECO:0000313|EMBL:KEF28006.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
alpha-L-rhamnosidase
L2_039_121G1_scaffold_323_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32677..33975)
DNA (1299bp) protein (433aa)
MFS-family sugar transporter n=4 Tax=Bifidobacterium dentium RepID=D2Q796_BIFDB
Sugar transporter {ECO:0000313|EMBL:KEF28005.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
sugar transporter
L2_039_121G1_scaffold_323_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34310..35356
DNA (1047bp) protein (349aa)
Transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATG7_BIFLN
Sugar-binding protein {ECO:0000313|EMBL:KEF28004.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
sugar-binding protein
L2_039_121G1_scaffold_323_27
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35709..35885
DNA (177bp) protein (59aa)
Transcriptional regulator, MerR family n=2 Tax=Bifidobacterium dentium RepID=E0Q536_9BIFI
MerR family transcriptional regulator {ECO:0000313|EMBL:ETY71746.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
MerR family transcriptional regulator
L2_039_121G1_scaffold_323_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36559..38058)
DNA (1500bp) protein (500aa)
Lincomycin resistance protein LmrB n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FGB0_9BIFI
Lincomycin resistance protein LmrB {ECO:0000313|EMBL:KEF28002.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
multidrug resistance protein B
L2_039_121G1_scaffold_323_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38303..40645)
DNA (2343bp) protein (781aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT49_9BIFI
Beta-D-glucosideglucohydrolase {ECO:0000313|EMBL:KEF28001.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
beta-D-glucosideglucohydrolase
L2_039_121G1_scaffold_323_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40814..41449)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A933_BIFAD
AcrR family transcriptional regulator {ECO:0000313|EMBL:KEF28000.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
putative TetR-type transcriptional regulator
Displaying items 1-30 of 32 in total

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