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L2_039_121G1_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_324_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..580)
DNA (579bp) protein (193aa)
UPI0003CFFAD0 related cluster n=1 Tax=unknown RepID=UPI0003CFFAD0
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31630.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
DNA helicase
L2_039_121G1_scaffold_324_2
unknown

Not on your lists

714..827
DNA (114bp) protein (38aa)

This feature has no annotations

L2_039_121G1_scaffold_324_3
unknown

Not on your lists

comp(929..1084)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_039_121G1_scaffold_324_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1084..2790)
DNA (1707bp) protein (569aa)
Putative hydrolase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQ82_BIFBS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31631.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hydrolase
L2_039_121G1_scaffold_324_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2847..3671)
DNA (825bp) protein (275aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUN1_BIFLJ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31632.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
competence protein ComEA
L2_039_121G1_scaffold_324_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3886..6858)
DNA (2973bp) protein (991aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I7A9_BIFBI
L2_039_121G1_scaffold_324_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6934..7812)
DNA (879bp) protein (293aa)
Solute binding protein of ABC transporter system n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1R3_BIFAA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31634.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter substrate-binding protein
L2_039_121G1_scaffold_324_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7893..8873)
DNA (981bp) protein (327aa)
CorA-like protein n=5 Tax=Bifidobacterium breve RepID=F6C956_BIFBA
CorA-like protein {ECO:0000313|EMBL:KFI90659.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Magnesium and cobalt transport protein corA
L2_039_121G1_scaffold_324_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9131..9973)
DNA (843bp) protein (281aa)
Phosphoglycerate mutase {ECO:0000313|EMBL:KFI90660.1}; EC=3.1.3.70 {ECO:0000313|EMBL:KFI90660.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Phosphoglycerate mutase family protein n=4 Tax=Bifidobacterium bifidum RepID=E4NX79_BIFBP
phosphoglycerate mutase
L2_039_121G1_scaffold_324_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10085..10807)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WKE2_9ACTN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31637.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L2_039_121G1_scaffold_324_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10804..11847)
DNA (1044bp) protein (348aa)
ABC transporter related protein n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2NA29_CORGP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31638.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter
L2_039_121G1_scaffold_324_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11844..12224)
DNA (381bp) protein (127aa)
Transcriptional regulator, GntR family n=1 Tax=Olsenella profusa F0195 RepID=U2V5P4_9ACTN
GntR family transcriptional regulator {ECO:0000313|EMBL:KFI90663.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
putative transcriptional regulator
L2_039_121G1_scaffold_324_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12554..13357)
DNA (804bp) protein (268aa)
Alpha/beta superfamily hydrolase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTW1_BIFLJ
Carboxylesterase {ECO:0000313|EMBL:KFI90664.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
alpha/beta superfamily hydrolase
L2_039_121G1_scaffold_324_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13435..14736)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RU67_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31641.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L2_039_121G1_scaffold_324_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14741..16429)
DNA (1689bp) protein (563aa)
Dioxygenase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RHF8_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31642.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
dioxygenase
L2_039_121G1_scaffold_324_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16648..17160
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZK69_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31643.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Hypothetical protein
L2_039_121G1_scaffold_324_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17162..17377
DNA (216bp) protein (72aa)
Transcriptional regulator n=20 Tax=Bifidobacterium RepID=D6D8X5_BIFLN
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:KFI90668.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Transcriptional regulator
L2_039_121G1_scaffold_324_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17461..18312)
DNA (852bp) protein (284aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
nfo; endonuclease IV Nfo (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VA28_BIFBI
L2_039_121G1_scaffold_324_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18611..20002
DNA (1392bp) protein (464aa)
Amino acid permease n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUB9_BIFLJ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31647.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
amino acid transporter
L2_039_121G1_scaffold_324_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20238..20753)
DNA (516bp) protein (172aa)
Toxin-antitoxin system, toxin component, GNAT family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CGP7_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31648.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
bar; phosphinothricin N-acetyl transferase
L2_039_121G1_scaffold_324_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21036..22265)
DNA (1230bp) protein (410aa)
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:KFI90672.1}; EC=3.2.2.3 {ECO:0000313|EMBL:KFI90672.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Bifidobacterium longum RepID=S3DIS9_BIFLN
nucleoside hydrolase
L2_039_121G1_scaffold_324_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22269..23360)
DNA (1092bp) protein (364aa)
Membrane lipoprotein lipid attachment site n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ08_BIFLS
Membrane lipoprotein lipid attachment site {ECO:0000313|EMBL:KFI90673.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
membrane lipoprotein lipid attachment site
L2_039_121G1_scaffold_324_23
unknown

Not on your lists

comp(23504..23761)
DNA (258bp) protein (86aa)

This feature has no annotations

L2_039_121G1_scaffold_324_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23814..24584
DNA (771bp) protein (257aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S724_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KFI90674.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
putative permease protein of ABC transporter system
L2_039_121G1_scaffold_324_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24818..28072)
DNA (3255bp) protein (1085aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WHC0_BIFBI
UPF0182 protein BBSC_1572 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
L2_039_121G1_scaffold_324_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28137..29498
DNA (1362bp) protein (454aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFU3_9BIFI
hypothetical protein
L2_039_121G1_scaffold_324_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29698..31062
DNA (1365bp) protein (455aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZUG4_BIFLJ
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:KFI90159.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
branched-chain amino acid transporter
L2_039_121G1_scaffold_324_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31070..31408)
DNA (339bp) protein (113aa)
Branched-chain amino acid permease n=2 Tax=Bifidobacterium RepID=A1A137_BIFAA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31655.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
alzD; branched-chain amino acid permease
L2_039_121G1_scaffold_324_29
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31405..32199)
DNA (795bp) protein (265aa)
Putative azaleucine resistance protein AzlC n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBB2_BIFLI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31656.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
branched-chain amino acid ABC transporter permease
L2_039_121G1_scaffold_324_30
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32418..32732)
DNA (315bp) protein (105aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31657.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Displaying items 1-30 of 40 in total

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