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L2_039_121G1_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_366_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(154..1758)
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1Y0_RUMGN
L2_039_121G1_scaffold_366_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2137..2286
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1Y2_RUMGN
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
50S ribosomal protein L33
L2_039_121G1_scaffold_366_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2308..2517
DNA (210bp) protein (70aa)
Protein translocase subunit SecE n=2 Tax=Clostridiales RepID=A7B1Y3_RUMGN
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
protein translocase subunit secE/sec61 gamma
L2_039_121G1_scaffold_366_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2544..3062
DNA (519bp) protein (173aa)
Transcription termination/antitermination protein NusG n=4 Tax=Clostridiales RepID=A7B1Y4_RUMGN
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcription antitermination protein nusG
L2_039_121G1_scaffold_366_5
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3116..3541
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=3 Tax=Clostridiales RepID=A7B1Y5_RUMGN
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
LSU ribosomal protein L11P
L2_039_121G1_scaffold_366_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3700..4392
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=4 Tax=Clostridiales RepID=A7B1Y6_RUMGN
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ribosomal protein L1, bacterial/chloroplast
L2_039_121G1_scaffold_366_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4599..5144
DNA (546bp) protein (182aa)
50S ribosomal protein L10 n=4 Tax=Clostridiales RepID=A7B1Y7_RUMGN
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
rplJ; 50S ribosomal protein L10
L2_039_121G1_scaffold_366_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5254..5631
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RWY1_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LSU ribosomal protein L12P
L2_039_121G1_scaffold_366_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5912..9769
DNA (3858bp) protein (1286aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=2 Tax=Clostridiales RepID=R5UAW2_9FIRM
L2_039_121G1_scaffold_366_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9784..13449
DNA (3666bp) protein (1222aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Lachnospiraceae RepID=F7JYK6_9FIRM
L2_039_121G1_scaffold_366_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13616..14281
DNA (666bp) protein (222aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5TR83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD19389.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted membrane protein
L2_039_121G1_scaffold_366_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14361..14510)
DNA (150bp) protein (50aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1Z3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46801.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_039_121G1_scaffold_366_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14634..15347)
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=4 Tax=Clostridiales RepID=A7B1Z5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46800.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
winged helix family two component transcriptional regulator
L2_039_121G1_scaffold_366_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15340..16410)
DNA (1071bp) protein (357aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Lachnospiraceae RepID=A7B1Z6_RUMGN
L2_039_121G1_scaffold_366_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16795..18777
DNA (1983bp) protein (661aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
V-type H(+)-translocating pyrophosphatase n=3 Tax=Lachnospiraceae RepID=V8BX83_RUMGN
L2_039_121G1_scaffold_366_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18959..20143)
DNA (1185bp) protein (395aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=4 Tax=Clostridiales RepID=A7B1Z8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46797.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_039_121G1_scaffold_366_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20143..21141)
DNA (999bp) protein (333aa)
DNA replication protein DnaC n=4 Tax=Clostridiales RepID=A7B1Z9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19383.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
replicative DNA helicase loader DnaI
L2_039_121G1_scaffold_366_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21157..22221)
DNA (1065bp) protein (355aa)
DnaD domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B200_RUMGN
DnaD domain protein {ECO:0000313|EMBL:EDN78272.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
DnaD and phage-associated domain
L2_039_121G1_scaffold_366_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22367..23743)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B201_RUMGN
L2_039_121G1_scaffold_366_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24002..25276
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=3 Tax=Lachnospiraceae RepID=A7B203_RUMGN
L2_039_121G1_scaffold_366_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25294..26391
DNA (1098bp) protein (366aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=4 Tax=Clostridiales RepID=A7B204_RUMGN
L2_039_121G1_scaffold_366_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26407..26721
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8BW28_RUMGN
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Uncharacterized protein, involved in the regulation of septum location
L2_039_121G1_scaffold_366_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26859..28472
DNA (1614bp) protein (538aa)
Potassium/proton antiporter n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B206_RUMGN
Potassium/proton antiporter {ECO:0000313|EMBL:EDN78278.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
conserved hypothetical protein
L2_039_121G1_scaffold_366_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28408..29094)
DNA (687bp) protein (229aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UHM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68322.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_039_121G1_scaffold_366_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29268..30494
DNA (1227bp) protein (409aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TR96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46788.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
L2_039_121G1_scaffold_366_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30494..31624
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BW72_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19374.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
toxic anion resistance family protein
L2_039_121G1_scaffold_366_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31976..33418
DNA (1443bp) protein (481aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B212_RUMGN
L2_039_121G1_scaffold_366_28
unknown

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33357..33566
DNA (210bp) protein (70aa)

This feature has no annotations

L2_039_121G1_scaffold_366_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33529..34329
DNA (801bp) protein (267aa)
Transporter, auxin efflux carrier (AEC) family protein n=3 Tax=Lachnospiraceae RepID=A7B213_RUMGN
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EDN78285.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted permeases
L2_039_121G1_scaffold_366_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


34519..34938
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=4 Tax=Clostridiales RepID=A7B214_RUMGN
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
SSU ribosomal protein S12P
Displaying items 1-30 of 52 in total

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