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L2_039_121G1_scaffold_382

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_382_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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41..340
DNA (300bp) protein (100aa)
Integration host factor subunit alpha n=1431 Tax=Enterobacteriaceae RepID=IHFA_ECO24
ihfA; integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L2_039_121G1_scaffold_382_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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441..1421
DNA (981bp) protein (327aa)
Vitamin B12 import system permease protein BtuC n=37 Tax=Escherichia RepID=D2NIY8_ECOS5
vitamin B12 ABC transport permease component
Vitamin B12 import system permease protein BtuC {ECO:0000256|SAAS:SAAS00165801}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_039_121G1_scaffold_382_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1484..2035
DNA (552bp) protein (184aa)
Glutathione peroxidase n=464 Tax=Enterobacteriaceae RepID=J7R532_ECOLX
btuE; putative glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
L2_039_121G1_scaffold_382_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2035..2784
DNA (750bp) protein (250aa)
vitamin B12-transporter ATPase (EC:3.6.3.33)
Vitamin B12 import ATP-binding protein BtuD {ECO:0000256|HAMAP-Rule:MF_01005}; EC=3.6.3.33 {ECO:0000256|HAMAP-Rule:MF_01005};; Vitamin B12-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01005}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Vitamin B12 import ATP-binding protein BtuD n=44 Tax=Escherichia coli RepID=D2NIY6_ECOS5
L2_039_121G1_scaffold_382_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2862..3326
DNA (465bp) protein (155aa)
Lipoprotein nlpC n=286 Tax=Enterobacteriaceae RepID=E2QMR9_ECOLX
lipoprotein
Putative peptidase lipoprotein {ECO:0000313|EMBL:EIL48972.1}; TaxID=752785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 541-15.;"
L2_039_121G1_scaffold_382_6
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3573..4286
DNA (714bp) protein (238aa)
Uncharacterized protein n=53 Tax=Escherichia RepID=D2NIY4_ECOS5
ydiV; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC78838.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_039_121G1_scaffold_382_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4349..5785
DNA (1437bp) protein (479aa)
UPF0061 protein YdiU n=36 Tax=Escherichia coli RepID=D2NIY3_ECOS5
hypothetical protein
UPF0061 protein YdiU {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_039_121G1_scaffold_382_8
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5789..5980)
DNA (192bp) protein (64aa)
Conserved protein, hemin uptake protein HemP-like protein n=31 Tax=Enterobacteriaceae RepID=G4Q0Q4_ECOLX
ydiE; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIQ30181.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L2_039_121G1_scaffold_382_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6112..7158)
DNA (1047bp) protein (349aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive n=625 Tax=Enterobacteriaceae RepID=AROH_ECOL6
L2_039_121G1_scaffold_382_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7315..8148)
DNA (834bp) protein (278aa)
Phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
Phosphoenolpyruvate synthase regulatory protein n=1208 Tax=Enterobacteriaceae RepID=PSRP_ECO24
hypothetical protein
L2_039_121G1_scaffold_382_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8481..10859
DNA (2379bp) protein (793aa)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:AJO83635.1}; EC=2.7.9.2 {ECO:0000313|EMBL:AJO83635.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Phosphoenolpyruvate synthase n=39 Tax=Escherichia coli RepID=D2NIX8_ECOS5
phosphoenolpyruvate synthase
L2_039_121G1_scaffold_382_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10916..12562)
DNA (1647bp) protein (549aa)
Short chain acyl-CoA synthetase, anaerobic n=250 Tax=Escherichia RepID=A1ABN8_ECOK1
Putative ligase {ECO:0000313|EMBL:BAI55101.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
ydiD; short chain acyl-CoA synthetase
L2_039_121G1_scaffold_382_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12619..12912)
DNA (294bp) protein (98aa)
Ferredoxin-like protein ydiT n=314 Tax=Escherichia RepID=E2QMR1_ECOLX
ydiT; 4Fe-4S ferredoxin
Ferredoxin-like protein ydiT {ECO:0000313|EMBL:EHU10772.1}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
L2_039_121G1_scaffold_382_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12909..14198)
DNA (1290bp) protein (430aa)
Probable electron transfer flavoprotein-quinone oxidoreductase FixC {ECO:0000313|EMBL:CDL47324.1}; EC=1.5.5.- {ECO:0000313|EMBL:CDL47324.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Oxidoreductase with FAD/NAD(P)-binding domain-containing protein n=36 Tax=Escherichia coli RepID=L2ZMN2_ECOLX
putative flavoprotein FixC
L2_039_121G1_scaffold_382_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14253..15191)
DNA (939bp) protein (313aa)
Electron transfer flavoprotein, FAD-binding n=36 Tax=Escherichia coli RepID=L2ZKS4_ECOLX
ydiR; Putative electron transfer flavoprotein
Putative electron transfer flavoprotein subunit YdiR {ECO:0000313|EMBL:CDN82201.1}; YdiR protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L2_039_121G1_scaffold_382_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15211..15975)
DNA (765bp) protein (255aa)
Electron transfer flavoprotein FixB n=123 Tax=Escherichia RepID=V8KVD6_ECOLX
putative flavoprotein FixA
Putative flavoprotein subunit required for anaerobic carnitine metabolism {ECO:0000313|EMBL:EHU46167.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L2_039_121G1_scaffold_382_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16291..17202
DNA (912bp) protein (304aa)
Uncharacterized HTH-type transcriptional regulator n=403 Tax=Enterobacteriaceae RepID=E2QMQ7_ECOLX
transcriptional regulator YdiP
Cupin domain protein {ECO:0000313|EMBL:EHU14991.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L2_039_121G1_scaffold_382_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17245..18396)
DNA (1152bp) protein (384aa)
Probable acyl-CoA dehydrogenase YdiO n=1151 Tax=Enterobacteriaceae RepID=YDIO_ECO57
acyl-CoA dehydrogenase domain-containing protein
Putative oxidoreductase {ECO:0000313|EMBL:CCK46930.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
L2_039_121G1_scaffold_382_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18410..20005)
DNA (1596bp) protein (532aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
Acetate CoA-transferase YdiF n=17 Tax=Escherichia coli RepID=E6AKW3_ECOLX
ydiF; fused predicted acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit
L2_039_121G1_scaffold_382_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20152..20910)
DNA (759bp) protein (253aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE14.;"
3-dehydroquinate dehydratase n=246 Tax=Enterobacteriaceae RepID=AROD_ECOBW
3-dehydroquinate dehydratase
L2_039_121G1_scaffold_382_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20941..21807)
DNA (867bp) protein (289aa)
shikimate 5-dehydrogenase (EC:1.1.1.282)
Quinate/shikimate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01578}; EC=1.1.1.282 {ECO:0000256|HAMAP-Rule:MF_01578};; NAD-dependent shikimate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01578}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Quinate/shikimate dehydrogenase n=27 Tax=Escherichia coli RepID=G0DD61_ECOLX
L2_039_121G1_scaffold_382_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21819..23084)
DNA (1266bp) protein (422aa)
Inner membrane transport protein ydiN n=382 Tax=Escherichia RepID=E2QMQ2_ECOLX
transporter
Inner membrane transport protein ydiN {ECO:0000313|EMBL:EZJ41395.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_039_121G1_scaffold_382_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23311..24525)
DNA (1215bp) protein (405aa)
Inner membrane transport protein ydiM n=330 Tax=Escherichia RepID=E2QMQ1_ECOLX
ydiM; major facilitator family transporter
Major facilitator superfamily protein {ECO:0000313|EMBL:CKI18329.1}; Transporter {ECO:0000313|EMBL:AJO83623.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_039_121G1_scaffold_382_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24625..24981)
DNA (357bp) protein (119aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NIW5_ECOS5
ydiL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ58827.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L2_039_121G1_scaffold_382_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25410..26522)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=273 Tax=Escherichia coli RepID=B7MVG4_ECO81
ydiK; putative inner membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDL42271.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L2_039_121G1_scaffold_382_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26736..29792
DNA (3057bp) protein (1019aa)
FAD linked oxidase, C-terminal domain protein n=40 Tax=Escherichia coli RepID=E6AKX0_ECOLX
Membrane protein {ECO:0000313|EMBL:AJO83620.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
ydiJ; Putative oxidase
L2_039_121G1_scaffold_382_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29789..30199
DNA (411bp) protein (137aa)
Esterase YdiI n=27 Tax=Escherichia coli RepID=L2ZLK2_ECOLX
acyl-CoA esterase
Thioesterase {ECO:0000313|EMBL:AJO83619.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_039_121G1_scaffold_382_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30299..30487
DNA (189bp) protein (63aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=D7XNJ2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:END91983.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L2_039_121G1_scaffold_382_29
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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31036..31404
DNA (369bp) protein (123aa)
Fe-S cluster assembly protein n=309 Tax=Escherichia RepID=A1ABM2_ECOK1
sufA; iron-sulfur cluster assembly scaffold protein
SufA protein {ECO:0000313|EMBL:CDC78788.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_039_121G1_scaffold_382_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31413..32900
DNA (1488bp) protein (496aa)
Cysteine desulfurase activator complex subunit n=27 Tax=Escherichia coli RepID=G0DCF0_ECOLX
ynhE; cysteine desulfurase activator complex subunit
Cysteine desulfurase {ECO:0000313|EMBL:AJO83617.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying items 1-30 of 35 in total

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