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L2_039_121G1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_393_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1212)
DNA (1212bp) protein (404aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
malP; Maltodextrin phosphorylase (EC:2.4.1.1)
Phosphorylase n=3 Tax=Lachnospiraceae RepID=A7B292_RUMGN
L2_039_121G1_scaffold_393_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1240..3183)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B291_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78363.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glycogen debranching protein
L2_039_121G1_scaffold_393_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3190..5136)
DNA (1947bp) protein (649aa)
pullulanase, type I (EC:3.2.1.41)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B290_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78362.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_039_121G1_scaffold_393_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5150..6022)
DNA (873bp) protein (291aa)
Sugar ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B289_RUMGN
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EDN78361.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_039_121G1_scaffold_393_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6025..7413)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B288_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78360.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
maltose/maltodextrin transport system permease
L2_039_121G1_scaffold_393_6
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7419..8192)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WU11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06085.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_039_121G1_scaffold_393_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8196..8651)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B286_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78358.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
maltose/maltodextrin transport system substrate-binding protein
L2_039_121G1_scaffold_393_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8658..8768)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68448.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_039_121G1_scaffold_393_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8947..9972
DNA (1026bp) protein (342aa)
Transcriptional regulators (EC:5.1.1.1)
Putative DNA-binding transcriptional regulator CytR n=2 Tax=Clostridiales RepID=A7B284_RUMGN
Putative DNA-binding transcriptional regulator CytR {ECO:0000313|EMBL:CCZ68447.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_039_121G1_scaffold_393_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9998..10885)
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5UBB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68446.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L2_039_121G1_scaffold_393_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11160..11810)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B280_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78352.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_039_121G1_scaffold_393_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11849..12316)
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B279_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78351.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, MarR family
L2_039_121G1_scaffold_393_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12359..13411)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B278_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46923.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Dioxygenases related to 2-nitropropane dioxygenase
L2_039_121G1_scaffold_393_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13444..15132)
DNA (1689bp) protein (563aa)
Acetyl-CoA carboxylase {ECO:0000256|SAAS:SAAS00057486}; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase, carboxyl transferase, beta subunit n=3 Tax=Lachnospiraceae RepID=V8BXT7_RUMGN
L2_039_121G1_scaffold_393_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15148..16491)
DNA (1344bp) protein (448aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Biotin carboxylase n=4 Tax=Clostridiales RepID=A7B276_RUMGN
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EGN46925.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_039_121G1_scaffold_393_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16494..16925)
DNA (432bp) protein (144aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=4 Tax=Clostridiales RepID=A7B275_RUMGN
L2_039_121G1_scaffold_393_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16939..17364)
DNA (426bp) protein (142aa)
Acetyl-CoA carboxylase n=4 Tax=Clostridiales RepID=F7JYG5_9FIRM
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EGN46927.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L2_039_121G1_scaffold_393_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17375..18613)
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Clostridiales RepID=A7B273_RUMGN
L2_039_121G1_scaffold_393_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18628..19368)
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B272_RUMGN
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EDN78344.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_039_121G1_scaffold_393_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19362..20282)
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Clostridiales RepID=A7B271_RUMGN
L2_039_121G1_scaffold_393_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20275..21213)
DNA (939bp) protein (313aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Enoyl-(Acyl-carrier-protein) reductase II n=4 Tax=Clostridiales RepID=F7JYG7_9FIRM
Enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:CCZ68435.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_039_121G1_scaffold_393_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21230..21454)
DNA (225bp) protein (75aa)
Acyl carrier protein n=4 Tax=Clostridiales RepID=A7B269_RUMGN
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acyl carrier protein
L2_039_121G1_scaffold_393_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21472..22434)
DNA (963bp) protein (321aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.180 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B268_RUMGN
L2_039_121G1_scaffold_393_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22560..22742)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B267_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ68432.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_039_121G1_scaffold_393_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23160..24536
DNA (1377bp) protein (459aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BWY4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46940.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Na+-driven multidrug efflux pump
L2_039_121G1_scaffold_393_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25261..26211)
DNA (951bp) protein (317aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRT4_9FIRM
L2_039_121G1_scaffold_393_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26195..27922)
DNA (1728bp) protein (576aa)
Beta-galactosidase large subunit n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JYD6_9FIRM
Beta-galactosidase large subunit {ECO:0000313|EMBL:EGN46942.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glycoside hydrolase family protein
L2_039_121G1_scaffold_393_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28123..28797)
DNA (675bp) protein (225aa)
DnaJ domain protein n=2 Tax=Clostridiales RepID=A7B258_RUMGN
DnaJ domain protein {ECO:0000313|EMBL:EDN78330.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L2_039_121G1_scaffold_393_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28843..29256)
DNA (414bp) protein (138aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B257_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46944.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_039_121G1_scaffold_393_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29370..30284)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UB93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68426.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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