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L2_039_121G1_scaffold_411

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_411_1
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(157..771)
DNA (615bp) protein (205aa)
R3H domain protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G8B2_9FIRM
R3H domain protein {ECO:0000313|EMBL:CDE23654.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
Jag protein
L2_039_121G1_scaffold_411_2
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(783..1769)
DNA (987bp) protein (329aa)
Membrane protein insertase YidC/Oxa1 family n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G925_9FIRM
Membrane protein insertase YidC/Oxa1 family {ECO:0000313|EMBL:CDE23655.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
protein translocase subunit yidC
L2_039_121G1_scaffold_411_3
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1801..2127)
DNA (327bp) protein (109aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
Ribonuclease P protein component n=2 Tax=Firmicutes RepID=A8RAI1_9FIRM
rnpA; ribonuclease P
L2_039_121G1_scaffold_411_4
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2900..4255
DNA (1356bp) protein (452aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Firmicutes RepID=A8RAI5_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
dnaA; chromosomal replication initiation protein
L2_039_121G1_scaffold_411_5
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4402..5520
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Firmicutes RepID=A8RAI6_9FIRM
L2_039_121G1_scaffold_411_6
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5666..5869
DNA (204bp) protein (68aa)
S4 domain protein YaaA n=2 Tax=Firmicutes RepID=A8RAI7_9FIRM
S4 domain protein YaaA {ECO:0000313|EMBL:EDP11644.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
s4-like RNA binding protein
L2_039_121G1_scaffold_411_7
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5866..6966
DNA (1101bp) protein (367aa)
DNA replication and repair protein RecF n=2 Tax=Firmicutes RepID=A8RAI8_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
recF; recombination protein F
L2_039_121G1_scaffold_411_8
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6978..8924
DNA (1947bp) protein (649aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
DNA gyrase subunit B n=2 Tax=Firmicutes RepID=A8RAI9_9FIRM
gyrB; DNA gyrase subunit B
L2_039_121G1_scaffold_411_9
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8939..11413
DNA (2475bp) protein (825aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
DNA gyrase subunit A n=2 Tax=Firmicutes RepID=A8RAJ1_9FIRM
gyrA; DNA gyrase subunit A
L2_039_121G1_scaffold_411_10
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11727..13013
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EDP11648.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EDP11648.1};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ2_9FIRM
L2_039_121G1_scaffold_411_11
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13426..13884
DNA (459bp) protein (153aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ3_9FIRM
adenosine deaminase
L2_039_121G1_scaffold_411_12
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13964..15727
DNA (1764bp) protein (588aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EDP11650.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDP11650.1};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM
L2_039_121G1_scaffold_411_13
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15731..16039
DNA (309bp) protein (103aa)
Nucleoid-associated protein EUBDOL_00830 n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ5_9FIRM
Nucleoid-associated protein EUBDOL_00830 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hypothetical protein
L2_039_121G1_scaffold_411_14
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16039..16629
DNA (591bp) protein (197aa)
Recombination protein RecR n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GCK2_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
recR; Recombination protein RecR
L2_039_121G1_scaffold_411_15
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16690..17634
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP11653.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hypothetical protein
L2_039_121G1_scaffold_411_16
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17698..18249)
DNA (552bp) protein (184aa)
Adenylate cyclase n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G8C8_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:CDE23669.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
adenylate cyclase
L2_039_121G1_scaffold_411_17
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18376..19146
DNA (771bp) protein (257aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
NAD(+)/NADH kinase n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAK0_9FIRM
L2_039_121G1_scaffold_411_18
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19159..19653
DNA (495bp) protein (165aa)
Acetyltransferase, GNAT family n=2 Tax=Firmicutes RepID=A8RAK1_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDE23671.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
acetyltransferase, GNAT family
L2_039_121G1_scaffold_411_19
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19745..20296)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RAK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23672.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L2_039_121G1_scaffold_411_20
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20457..21290
DNA (834bp) protein (278aa)
EDD domain protein, DegV family n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAK4_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EDP11658.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hypothetical protein
L2_039_121G1_scaffold_411_21
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21402..21707
DNA (306bp) protein (102aa)
Transcriptional regulator ArsR family n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G8D5_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CDE23674.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
arsR; arsenical resistance operon repressor
L2_039_121G1_scaffold_411_22
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21777..22790
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G949_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23675.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
permease
L2_039_121G1_scaffold_411_23
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22807..23139
DNA (333bp) protein (111aa)
Redox-active disulfide protein 2 n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G9L3_9FIRM
Redox-active disulfide protein 2 {ECO:0000313|EMBL:CDE23676.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
redox-active disulfide protein 2
L2_039_121G1_scaffold_411_24
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23169..23576
DNA (408bp) protein (136aa)
arsC; arsenate reductase (EC:1.20.4.1)
Low molecular weight phosphotyrosine protein phosphatase n=2 Tax=Firmicutes RepID=A8RAL0_9FIRM
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:CDE23677.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L2_039_121G1_scaffold_411_25
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23696..24265
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GA60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23678.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L2_039_121G1_scaffold_411_26
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24274..24936
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP11664.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hypothetical protein
L2_039_121G1_scaffold_411_27
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25049..25261
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RAL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23679.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L2_039_121G1_scaffold_411_28
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25352..27241)
DNA (1890bp) protein (630aa)
Universal stress family protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G954_9FIRM
Universal stress family protein {ECO:0000313|EMBL:CDE23680.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
kdpD; hypothetical protein
L2_039_121G1_scaffold_411_29
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27422..27520
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G9L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23681.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L2_039_121G1_scaffold_411_30
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27627..29363
DNA (1737bp) protein (579aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
Potassium-transporting ATPase A chain n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7GCL6_9FIRM
potassium-transporting ATPase subunit A
Displaying items 1-30 of 34 in total

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