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L2_039_121G1_scaffold_436

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_436_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..3086)
DNA (3084bp) protein (1028aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Alpha amylase, catalytic domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6R7_BIFAD
alpha amylase
L2_039_121G1_scaffold_436_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3536..4183)
DNA (648bp) protein (216aa)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6R9_BIFAD
Low molecular weight protein-tyrosine-phosphatase Wzb
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EDN82502.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L2_039_121G1_scaffold_436_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4262..5497)
DNA (1236bp) protein (412aa)
Fic family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6S0_BIFAD
bacterial regulatory protein
Regulatory protein {ECO:0000313|EMBL:KFI95042.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_039_121G1_scaffold_436_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5702..6877)
DNA (1176bp) protein (392aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6S1_BIFAD
hypothetical protein
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EDN82504.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L2_039_121G1_scaffold_436_5
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7101..8708)
DNA (1608bp) protein (536aa)
Widely conserved hypothetical transport protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GR72_9BIFI
Widely conserved hypothetical transport protein {ECO:0000313|EMBL:CCY18249.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
putative transport protein
L2_039_121G1_scaffold_436_6
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8961..10295
DNA (1335bp) protein (445aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GLD9_9BIFI
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CCY18250.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Diguanylate cyclase
L2_039_121G1_scaffold_436_7
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10410..11693)
DNA (1284bp) protein (428aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6S5_BIFAD
H(+)-stimulated manganese uptake system protein {ECO:0000313|EMBL:KFI95038.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
H(+)-stimulated manganese uptake system protein
L2_039_121G1_scaffold_436_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11859..12713
DNA (855bp) protein (285aa)
Dehydrogenase or reductase protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A394_BIFAA
dehydrogenase or reductase protein
Dehydrogenase or reductase protein {ECO:0000313|EMBL:BAF40177.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_039_121G1_scaffold_436_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12706..13479
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6S7_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82510.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L2_039_121G1_scaffold_436_10
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13790..14863)
DNA (1074bp) protein (358aa)
LacI-type transcriptional regulator n=3 Tax=Bifidobacterium RepID=A1A398_BIFAA
LacI-type transcriptional regulator
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29782.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L2_039_121G1_scaffold_436_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14908..17010)
DNA (2103bp) protein (701aa)
Beta-galactosidase BgaB; Short=Beta-gal;; EC=3.2.1.23;; Beta-Gal II; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Beta-galactosidase BgaB n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=BGAL_BIFAA
bgaB; beta-galactosidase I
L2_039_121G1_scaffold_436_12
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17065..19320)
DNA (2256bp) protein (752aa)
Beta-galactosidase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H492_9BIFI
Beta-galactosidase {ECO:0000313|EMBL:CCY19556.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
beta-galactosidase
L2_039_121G1_scaffold_436_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19362..20195)
DNA (834bp) protein (278aa)
Multiple sugar-binding transport system permease n=3 Tax=Bifidobacterium RepID=A1A3A1_BIFAA
multiple sugar-binding transport system permease
ABC transporter permease {ECO:0000313|EMBL:KEF27963.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
L2_039_121G1_scaffold_436_14
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20192..21064)
DNA (873bp) protein (291aa)
ABC-type sugar transport systems, permease components n=3 Tax=Bifidobacterium RepID=A1A3A2_BIFAA
malF; sugar ABC transporter permease
ABC-type sugar transport systems permease components {ECO:0000313|EMBL:CCY19553.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_039_121G1_scaffold_436_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21256..22530)
DNA (1275bp) protein (425aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6T7_BIFAD
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDN82520.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
putative periplasmic binding (signal peptide) ABC transporter protein
L2_039_121G1_scaffold_436_16
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23084..23776)
DNA (693bp) protein (231aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
glutamine amidotransferase n=1 Tax=Bifidobacterium adolescentis RepID=UPI00006DD88A
pdxT; glutamine amidotransferase subunit PdxT
L2_039_121G1_scaffold_436_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23864..24805)
DNA (942bp) protein (314aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6U0_BIFAD
pyridoxal biosynthesis lyase PdxS
L2_039_121G1_scaffold_436_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25164..29255)
DNA (4092bp) protein (1364aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6U2_BIFAD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN82526.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ATP binding protein of ABC transporter
L2_039_121G1_scaffold_436_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29843..31666
DNA (1824bp) protein (608aa)
Probable long-chain-fatty acid CoA ligase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3A7_BIFAA
AMP-binding protein {ECO:0000313|EMBL:KIM01126.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
long-chain-fatty acid CoA ligase
L2_039_121G1_scaffold_436_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31858..33060)
DNA (1203bp) protein (401aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L-arabinose isomerase n=3 Tax=Bifidobacterium RepID=ARAA_BIFAA
L-arabinose isomerase
Displaying 20 items

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