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L2_039_121G1_scaffold_605

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_605_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..138)
DNA (138bp) protein (46aa)
Uncharacterized protein (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM55495.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Protein of unknown function DUF2088
L2_039_121G1_scaffold_605_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122..1270)
DNA (1149bp) protein (383aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27191.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_121G1_scaffold_605_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1285..2763)
DNA (1479bp) protein (493aa)
Membrane protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54050.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_121G1_scaffold_605_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2779..3255)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27193.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_121G1_scaffold_605_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3350..4330)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27194.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_121G1_scaffold_605_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4378..5424)
DNA (1047bp) protein (349aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
uxuA; mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMI5_9FIRM
L2_039_121G1_scaffold_605_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5421..6326)
DNA (906bp) protein (302aa)
Dihydrodipicolinate synthetase family protein n=2 Tax=Clostridiales RepID=G9YMI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27196.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dihydrodipicolinate synthetase
L2_039_121G1_scaffold_605_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6359..8050)
DNA (1692bp) protein (564aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BF02_9CLOT
L2_039_121G1_scaffold_605_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8047..8877)
DNA (831bp) protein (277aa)
Transcriptional regulator, IclR family protein n=3 Tax=Clostridiales RepID=G9YMI8_9FIRM
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:ERI76688.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
IclR family transcriptional regulator
L2_039_121G1_scaffold_605_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9023..9337
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D5C1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76687.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_039_121G1_scaffold_605_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9344..10360
DNA (1017bp) protein (339aa)
Putative HTH-type transcriptional repressor CytR n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DB03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54043.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
LacI family transcriptional regulator
L2_039_121G1_scaffold_605_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10397..11422
DNA (1026bp) protein (342aa)
Sugar-binding domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54042.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
LacI family transcriptional regulator
L2_039_121G1_scaffold_605_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11501..13012
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CJJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54041.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter
L2_039_121G1_scaffold_605_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13018..14067
DNA (1050bp) protein (350aa)
Putative ribose ABC transporter permease protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BY18_9CLOT
Putative ribose ABC transporter permease protein {ECO:0000313|EMBL:ERI76683.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type transporter, integral membrane subunit
L2_039_121G1_scaffold_605_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14089..15129
DNA (1041bp) protein (347aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Clostridiales RepID=U2D5A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO27203.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
oxidoreductase domain containing protein
L2_039_121G1_scaffold_605_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15149..16063
DNA (915bp) protein (305aa)
AP endonuclease, family 2 n=3 Tax=Clostridiales RepID=G9YMJ6_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EHM54074.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
xylose isomerase domain-containing protein TIM barrel
L2_039_121G1_scaffold_605_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16297..17109
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27205.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
AMP-dependent synthetase and ligase
L2_039_121G1_scaffold_605_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17120..18094
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27206.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
oxidoreductase domain protein
L2_039_121G1_scaffold_605_19
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18169..18414)
DNA (246bp) protein (82aa)
Integrase core domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EJA9_9CLOT
Integrase core domain protein {ECO:0000313|EMBL:EEG28443.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
putative transposase
L2_039_121G1_scaffold_605_20
unknown

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comp(18847..19023)
DNA (177bp) protein (59aa)

This feature has no annotations

L2_039_121G1_scaffold_605_21
unknown

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19222..20271
DNA (1050bp) protein (350aa)

This feature has no annotations

L2_039_121G1_scaffold_605_22
unknown

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comp(20295..20465)
DNA (171bp) protein (57aa)

This feature has no annotations

L2_039_121G1_scaffold_605_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20819..21577)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27207.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
GntR family transcriptional regulator
L2_039_121G1_scaffold_605_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21673..23112)
DNA (1440bp) protein (480aa)
succinate CoA transferase (EC:3.1.2.1)
Acetyl-CoA hydrolase/transferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54033.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_121G1_scaffold_605_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23218..24417)
DNA (1200bp) protein (400aa)
Acetyl-CoA C-acetyltransferase (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54032.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
acetyl-CoA acetyltransferase
L2_039_121G1_scaffold_605_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24440..24550)
DNA (111bp) protein (37aa)
NAD-dependent malic enzyme n=2 Tax=Clostridiales RepID=U2C1S5_9CLOT
NAD-dependent malic enzyme {ECO:0000313|EMBL:ERI61341.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Displaying 26 items

View Taxonomy