ggKbase home page

L2_039_121G1_scaffold_2034

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_2034_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1..708)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89683.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_2034_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(833..2239)
DNA (1407bp) protein (469aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDZ4_9FIRM
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EEC89027.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
putative endo-beta-N-acetylglucosaminidase
L2_039_121G1_scaffold_2034_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2405..3481
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDZ3_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
bacterial peptide chain release factor 1 (bRF-1)
L2_039_121G1_scaffold_2034_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3481..4329
DNA (849bp) protein (283aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDZ2_9FIRM
L2_039_121G1_scaffold_2034_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4427..4996
DNA (570bp) protein (190aa)
Rubredoxin n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDZ1_9FIRM
Rubredoxin {ECO:0000313|EMBL:EEC89024.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ferredoxin hydrogenase
L2_039_121G1_scaffold_2034_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5092..5958
DNA (867bp) protein (289aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDZ0_9FIRM
L2_039_121G1_scaffold_2034_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5971..7344
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDY9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEC89022.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
putative efflux protein, MATE family
L2_039_121G1_scaffold_2034_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7693..8004
DNA (312bp) protein (104aa)
Toxin-antitoxin system, antitoxin component, HicB family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDY7_9FIRM
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:EEC89020.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
Displaying 8 items

View Taxonomy