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L2_039_121G1_scaffold_1627

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_1627_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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395..841
DNA (447bp) protein (149aa)
Free methionine-(R)-sulfoxide reductase YebR {ECO:0000313|EMBL:EEC91079.1}; EC=1.8.4.14 {ECO:0000313|EMBL:EEC91079.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Free methionine-(R)-sulfoxide reductase YebR n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C822_9FIRM
GAF domain-containing protein
L2_039_121G1_scaffold_1627_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(825..1538)
DNA (714bp) protein (238aa)
Aminoglycoside N3'-acetyltransferase (EC:2.3.1.81)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C823_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91080.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_1627_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1555..3036)
DNA (1482bp) protein (494aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Glycerol kinase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C824_9FIRM
glpK; glycerol kinase
L2_039_121G1_scaffold_1627_4
unknown

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3054..3197
DNA (144bp) protein (48aa)

This feature has no annotations

L2_039_121G1_scaffold_1627_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3130..5517)
DNA (2388bp) protein (796aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C825_9FIRM
L2_039_121G1_scaffold_1627_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5530..6564)
DNA (1035bp) protein (345aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C826_9FIRM
L2_039_121G1_scaffold_1627_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6869..7603
DNA (735bp) protein (245aa)
RNA methyltransferase, TrmH family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C827_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EEC91084.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
tRNA/rRNA methyltransferase SpoU
L2_039_121G1_scaffold_1627_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7610..8929)
DNA (1320bp) protein (440aa)
MATE efflux family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C828_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEC91085.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
MATE efflux family protein
L2_039_121G1_scaffold_1627_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9016..9201)
DNA (186bp) protein (62aa)
Phosphopentomutase {ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|SAAS:SAAS00009998};; Flags: Fragment;; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase (Fragment) n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C829_9FIRM
Displaying 9 items

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