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L2_039_121G1_scaffold_625

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_625_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1..1728
DNA (1728bp) protein (576aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCJ3_9FIRM
L2_039_121G1_scaffold_625_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1754..2098
DNA (345bp) protein (115aa)
DNA-directed RNA polymerase, delta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase, delta subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCJ4_9FIRM
Probable DNA-directed RNA polymerase subunit delta {ECO:0000256|SAAS:SAAS00238291}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_625_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2242..3072
DNA (831bp) protein (277aa)
ABC-2 type transporter n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCJ5_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:EEC89507.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_625_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3083..3901
DNA (819bp) protein (273aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCJ6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC89508.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_625_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3981..4367
DNA (387bp) protein (129aa)
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:EEC89509.1}; EC=2.7.7.39 {ECO:0000313|EMBL:EEC89509.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Glycerol-3-phosphate cytidylyltransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCJ7_9FIRM
glycerol-3-phosphate cytidylyltransferase
L2_039_121G1_scaffold_625_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4369..6606
DNA (2238bp) protein (746aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEC89510.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEC89510.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCJ8_9FIRM
teichoic acid biosynthesis protein F
L2_039_121G1_scaffold_625_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6623..7828
DNA (1206bp) protein (402aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCJ9_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:EEC89511.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_625_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7830..8894
DNA (1065bp) protein (355aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK0_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:EEC89512.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_625_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9278..10471
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89513.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_625_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10480..11124)
DNA (645bp) protein (215aa)
RelA/SpoT domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK2_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:EEC89514.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_625_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11127..11714)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89515.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_625_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11851..12552
DNA (702bp) protein (234aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK4_9FIRM
methyltransferase gidB
L2_039_121G1_scaffold_625_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12555..13331
DNA (777bp) protein (259aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK5_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EEC89517.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
soj; chromosome partitioning ATPase
L2_039_121G1_scaffold_625_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13335..14213
DNA (879bp) protein (293aa)
ParB-like protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK6_9FIRM
ParB-like protein {ECO:0000313|EMBL:EEC89518.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ParB-like partition protein
L2_039_121G1_scaffold_625_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14451..16256
DNA (1806bp) protein (602aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK7_9FIRM
L2_039_121G1_scaffold_625_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16257..16778)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89520.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_625_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16998..17321
DNA (324bp) protein (108aa)
Phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIA subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCK9_9FIRM
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:EEC89521.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_625_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17314..17610
DNA (297bp) protein (99aa)
Phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCL0_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EEC89522.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_625_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17614..18888
DNA (1275bp) protein (425aa)
PTS system lactose/cellobiose family transporter subunit IIC (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCL1_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_625_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18885..20651
DNA (1767bp) protein (589aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCL2_9FIRM
L2_039_121G1_scaffold_625_21
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20835..22661
DNA (1827bp) protein (609aa)
PRD domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCL3_9FIRM
PRD domain protein {ECO:0000313|EMBL:EEC89525.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
transcriptional antiterminator
L2_039_121G1_scaffold_625_22
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22654..23382
DNA (729bp) protein (243aa)
Purine-nucleoside phosphorylase {ECO:0000256|SAAS:SAAS00035203}; EC=2.4.2.1 {ECO:0000256|SAAS:SAAS00035203};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCL4_9FIRM
L2_039_121G1_scaffold_625_23
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

23383..23745
DNA (363bp) protein (121aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Phosphopentomutase n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5ZHF6_9FIRM
hypothetical protein
Displaying 23 items

View Taxonomy