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L2_039_121G1_scaffold_720

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_720_1
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(80..1825)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VJC4_9FIRM
Transposase {ECO:0000313|EMBL:CRH76802.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Transposase
L2_039_121G1_scaffold_720_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2036..3553
DNA (1518bp) protein (506aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCL8_9FIRM
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EEC89471.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
extracellular solute-binding protein
L2_039_121G1_scaffold_720_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3735..4718
DNA (984bp) protein (328aa)
ABC transporter, permease protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCL9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEC89472.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
appB; Oligopeptide transport system permease protein AppB
L2_039_121G1_scaffold_720_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4732..5643
DNA (912bp) protein (304aa)
ABC transporter, permease protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM0_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEC89473.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
oppC9; Glutathione transport system permease protein gsiD
L2_039_121G1_scaffold_720_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5659..6678
DNA (1020bp) protein (340aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC89474.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
oligopeptide/dipeptide ABC transporter ATPase
L2_039_121G1_scaffold_720_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6681..7664
DNA (984bp) protein (328aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC89475.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
oligopeptide/dipeptide ABC transporter ATPase
L2_039_121G1_scaffold_720_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7664..7855
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89476.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_720_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7898..9592
DNA (1695bp) protein (565aa)
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:EEC89477.1}; EC=3.4.24.- {ECO:0000313|EMBL:EEC89477.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
M3 family oligoendopeptidase (EC:3.4.24.-)
Oligoendopeptidase, M3 family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM4_9FIRM
L2_039_121G1_scaffold_720_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9687..9896
DNA (210bp) protein (70aa)
50S ribosomal protein L31 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM5_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L31P
L2_039_121G1_scaffold_720_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10125..11291
DNA (1167bp) protein (389aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEC89479.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEC89479.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
dapL2; LL-diaminopimelate aminotransferase DapL (EC:2.6.1.83)
Aminotransferase, class I/II n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM6_9FIRM
L2_039_121G1_scaffold_720_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11329..12495
DNA (1167bp) protein (389aa)
Helicase C-terminal domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM7_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEC89480.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
L2_039_121G1_scaffold_720_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12492..13106
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89481.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted amidophosphoribosyltransferases
L2_039_121G1_scaffold_720_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13134..14465
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89482.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_720_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14556..15557
DNA (1002bp) protein (334aa)
UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase (EC:2.7.7.23 2.3.1.157)
Putative UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCN0_9FIRM
Putative UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:EEC89483.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_720_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15586..16542
DNA (957bp) protein (319aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCN1_9FIRM
ribose-phosphate pyrophosphokinase
L2_039_121G1_scaffold_720_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16535..16897
DNA (363bp) protein (121aa)
Transcriptional regulator, Spx/MgsR family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCN2_9FIRM
Transcriptional regulator, Spx/MgsR family {ECO:0000313|EMBL:EEC89485.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ArsC family protein
L2_039_121G1_scaffold_720_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16921..17670)
DNA (750bp) protein (250aa)
Hydrolase, TatD family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCN3_9FIRM
Hydrolase, TatD family {ECO:0000313|EMBL:EEC89486.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
yabD; hypothetical protein
L2_039_121G1_scaffold_720_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17723..18154
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89487.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_720_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18270..18440
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89488.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_720_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18569..19225
DNA (657bp) protein (219aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCN6_9FIRM
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EEC89489.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ntcA2; global nitrogen regulator NtcA
L2_039_121G1_scaffold_720_21
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19246..20583)
DNA (1338bp) protein (446aa)
MATE efflux family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCN7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEC89490.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
MATE efflux family protein
L2_039_121G1_scaffold_720_22
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20580..21914)
DNA (1335bp) protein (445aa)
MATE efflux family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCN8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEC89491.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
putative efflux protein, MATE family
L2_039_121G1_scaffold_720_23
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21988..22275)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89683.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
Displaying 23 items

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