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L2_039_121G1_scaffold_735

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_735_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(115..861)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C796_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91381.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
metallophosphatase
L2_039_121G1_scaffold_735_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1307..3043
DNA (1737bp) protein (579aa)
Carbon starvation protein CstA n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C795_9FIRM
Carbon starvation protein CstA {ECO:0000313|EMBL:EEC91380.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_735_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3428..5053)
DNA (1626bp) protein (542aa)
DAK2 domain fusion protein YloV n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C794_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EEC91379.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
yloV; DAK2 domain-containing protein YloV
L2_039_121G1_scaffold_735_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5064..5423)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C793_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91378.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
alkaline shock protein
L2_039_121G1_scaffold_735_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5479..6402)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C792_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91377.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_735_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6456..7355)
DNA (900bp) protein (300aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C791_9FIRM
L2_039_121G1_scaffold_735_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7357..8439)
DNA (1083bp) protein (361aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C790_9FIRM
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
L2_039_121G1_scaffold_735_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8469..9218)
DNA (750bp) protein (250aa)
Sortase, SrtB family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C789_9FIRM
Sortase, SrtB family {ECO:0000313|EMBL:EEC91374.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
sortase, SrtB family
L2_039_121G1_scaffold_735_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9288..10007)
DNA (720bp) protein (240aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C788_9FIRM
L2_039_121G1_scaffold_735_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10197..11522
DNA (1326bp) protein (442aa)
Tagatose-6-phosphate kinase {ECO:0000313|EMBL:EEC91372.1}; EC=2.7.1.144 {ECO:0000313|EMBL:EEC91372.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Tagatose-6-phosphate kinase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C787_9FIRM
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L2_039_121G1_scaffold_735_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11585..12133)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C786_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91371.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_735_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12143..12724)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C785_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91370.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_735_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12870..13745)
DNA (876bp) protein (292aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C784_9FIRM
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EEC91369.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
PTS system transporter subunit IID
L2_039_121G1_scaffold_735_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13735..14526)
DNA (792bp) protein (264aa)
PTS system sorbose-specific iic component n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C783_9FIRM
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EEC91368.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
PTS system sorbose-specific transporter subunit IIC
L2_039_121G1_scaffold_735_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14550..15026)
DNA (477bp) protein (159aa)
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EEC91367.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEC91367.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C782_9FIRM
agaB; PTS system N-acetylgalactosamine-specific IIB component
L2_039_121G1_scaffold_735_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15266..16432)
DNA (1167bp) protein (389aa)
Amidohydrolase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C781_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EEC91366.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
amidohydrolase
L2_039_121G1_scaffold_735_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16530..16961)
DNA (432bp) protein (144aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
PTS system fructose IIA component n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C780_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:EEC91365.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_735_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16985..18163)
DNA (1179bp) protein (393aa)
galactosamine 6-phosphate isomerase AgaS (EC:5.-.-.-)
Sugar isomerase, AgaS family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C779_9FIRM
Sugar isomerase, AgaS family {ECO:0000313|EMBL:EEC91364.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_735_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18303..19154)
DNA (852bp) protein (284aa)
Aldose 1-epimerase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C778_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:EEC91363.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
aldose 1-epimerase
L2_039_121G1_scaffold_735_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19178..19936)
DNA (759bp) protein (253aa)
Cof-like hydrolase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C777_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EEC91362.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
HAD-superfamily hydrolase, subfamily IIB
Displaying 20 items

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