name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L2_039_121G1_scaffold_875_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
2..856
|
Transposase Int-Tn n=6 Tax=Clostridium difficile RepID=T2TE91_CLODI
int1; Integrase Tn1549-like, CTn4-Orf34
Integrase {ECO:0000313|EMBL:CKG93422.1}; Integrase Tn1549-like, CTn4-Orf34 {ECO:0000313|EMBL:CEJ97653.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
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L2_039_121G1_scaffold_875_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
1168..1986
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90887.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
|
|
L2_039_121G1_scaffold_875_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(2007..3815)
|
Putative Na/Pi-cotransporter II-like protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q1_9FIRM
Putative Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EEC90888.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Na+/phosphate symporter
|
|
L2_039_121G1_scaffold_875_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(3985..4626)
|
Peptidase, M50 family {ECO:0000313|EMBL:EEC90889.1}; EC=3.4.24.- {ECO:0000313|EMBL:EEC90889.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Peptidase, M50 family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q2_9FIRM
peptidase M50
|
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L2_039_121G1_scaffold_875_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(4619..5722)
|
Ribosome-binding ATPase YchF n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q3_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
50S ribosome-binding GTPase family protein
|
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L2_039_121G1_scaffold_875_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(5741..5932)
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90891.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
|
|
L2_039_121G1_scaffold_875_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(5935..6789)
|
folD; methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q5_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
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L2_039_121G1_scaffold_875_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(6789..7238)
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D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q6_9FIRM
D-tyrosyl-tRNA(Tyr) deacylase
|
|
L2_039_121G1_scaffold_875_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(7235..7720)
|
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q7_9FIRM
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L2_039_121G1_scaffold_875_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(7713..8228)
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Nitroreductase family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q8_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:EEC90895.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Nitroreductase
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L2_039_121G1_scaffold_875_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(8316..9380)
|
Cell wall-binding repeat protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Q9_9FIRM
Cell wall-binding repeat protein {ECO:0000313|EMBL:EEC90896.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
NlpC/P60 family.
|
|
L2_039_121G1_scaffold_875_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(9515..10261)
|
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8R0_9FIRM
|
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L2_039_121G1_scaffold_875_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(10280..11464)
|
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8R1_9FIRM
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L2_039_121G1_scaffold_875_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(11572..12045)
|
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8R2_9FIRM
hypothetical protein
|
|
L2_039_121G1_scaffold_875_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(12042..12752)
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90900.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted ATPase
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L2_039_121G1_scaffold_875_16
Firmicutes bacterium CAG:536, Firmicutes, Bacteria
|
Not on your lists |
comp(12859..14826)
|
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5ZA88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA33714.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
Predicted permease.
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L2_039_121G1_scaffold_875_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(14819..15586)
|
Putative bacteriocin export ABC transporter, lactococcin 972 group n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8R6_9FIRM
Putative bacteriocin export ABC transporter, lactococcin 972 group {ECO:0000313|EMBL:EEC90814.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ABC-type antimicrobial peptide transport system, ATPase component
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L2_039_121G1_scaffold_875_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(15678..16667)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8R7_9FIRM
Signal transduction histidine kinase
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L2_039_121G1_scaffold_875_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(16694..17359)
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Response regulator receiver domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8R8_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEC90816.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
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