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L2_039_121G1_scaffold_884

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_884_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(52..327)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89128.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_884_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(320..508)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CE02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89009.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_884_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(520..1212)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CE01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89008.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_884_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1294..1635)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CE00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89007.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_884_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1613..1978)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89161.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_884_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2021..2674)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89162.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_884_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2733..2864)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89133.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_884_8
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3070..3360)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDL8_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH79966.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L2_039_121G1_scaffold_884_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3360..3638)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89129.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_884_10
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3640..3939)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM0_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH79968.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L2_039_121G1_scaffold_884_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3914..4096)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89131.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_884_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4053..4280)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89132.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_884_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4240..4371)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89133.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_884_14
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

4628..5143
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM4_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH80738.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L2_039_121G1_scaffold_884_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5161..5904)
DNA (744bp) protein (248aa)
Putative membrane protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM5_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEC89135.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_884_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6038..7132
DNA (1095bp) protein (365aa)
Threonine/alanine tRNA ligase second additional domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM6_9FIRM
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:EEC89136.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
L2_039_121G1_scaffold_884_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7137..7964)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89137.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_884_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8018..8767)
DNA (750bp) protein (250aa)
CorA-like protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDM8_9FIRM
CorA-like protein {ECO:0000313|EMBL:EEC89138.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Mg2 transporter protein CorA family protein
L2_039_121G1_scaffold_884_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8817..9212)
DNA (396bp) protein (132aa)
Hsp20/alpha crystallin family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDN0_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:EEC89140.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
heat shock protein Hsp20
L2_039_121G1_scaffold_884_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9233..9628)
DNA (396bp) protein (132aa)
Hsp20/alpha crystallin family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDN0_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:EEC89140.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
heat shock protein Hsp20
L2_039_121G1_scaffold_884_21
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10205..11425)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90962.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted ATPase (AAA+ superfamily)
L2_039_121G1_scaffold_884_22
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11739..11918)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GD85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10772.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L2_039_121G1_scaffold_884_23
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12090..15299)
DNA (3210bp) protein (1070aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDN6_9FIRM
carB; carbamoyl phosphate synthase large subunit
L2_039_121G1_scaffold_884_24
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15292..16368)
DNA (1077bp) protein (359aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDN7_9FIRM
Displaying 24 items

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