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L2_039_121G1_scaffold_955

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_121G1_scaffold_955_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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271..741
DNA (471bp) protein (157aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCH0_9FIRM
Cu binding protein
L2_039_121G1_scaffold_955_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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848..2611
DNA (1764bp) protein (588aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEC89540.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEC89540.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA polymerase III, subunit gamma and tau n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM
dnaX; DNA polymerase III subunits gamma and tau
L2_039_121G1_scaffold_955_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2622..3209
DNA (588bp) protein (196aa)
Recombination protein RecR n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG8_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
recR; recombination protein RecR
L2_039_121G1_scaffold_955_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3901..4449
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89538.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_955_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4446..4991)
DNA (546bp) protein (182aa)
Adenylate cyclase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG6_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:EEC89537.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_039_121G1_scaffold_955_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5046..5819
DNA (774bp) protein (258aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG5_9FIRM
L2_039_121G1_scaffold_955_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5811..7034)
DNA (1224bp) protein (408aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG4_9FIRM
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EEC89535.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
FtsW/RodA/SpoVE family cell division protein
L2_039_121G1_scaffold_955_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7122..9662
DNA (2541bp) protein (847aa)
DNA mismatch repair protein MutS n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG3_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA mismatch repair protein MutS
L2_039_121G1_scaffold_955_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9695..11521
DNA (1827bp) protein (609aa)
DNA mismatch repair protein MutL n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG2_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
mutL; DNA mismatch repair protein
L2_039_121G1_scaffold_955_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11514..12428
DNA (915bp) protein (305aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG1_9FIRM
L2_039_121G1_scaffold_955_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12415..13101
DNA (687bp) protein (229aa)
tRNA threonylcarbamoyladenosine dehydratase (EC:6.1.-.-)
ThiF family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG0_9FIRM
ThiF family protein {ECO:0000313|EMBL:EEC89531.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_039_121G1_scaffold_955_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13119..14018
DNA (900bp) protein (300aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EEC89530.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEC89530.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Lipid kinase, YegS/Rv2252/BmrU family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCF9_9FIRM
hypothetical protein
L2_039_121G1_scaffold_955_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14057..15328
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89529.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Hemolysins and related proteins containing CBS domains
Displaying 13 items

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