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L2_039_239G1_scaffold_2523

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_2523_1
unknown

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1..615
DNA (615bp) protein (205aa)

This feature has no annotations

L2_039_239G1_scaffold_2523_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(466..1242)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EDB6_BIFLI
M protein E1 {ECO:0000313|EMBL:KFI71304.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_239G1_scaffold_2523_3
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1254..2015)
DNA (762bp) protein (254aa)
Transglutaminase-like superfamily protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0P9_9BIFI
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:EFV36537.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_039_239G1_scaffold_2523_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2219..4399)
DNA (2181bp) protein (727aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y0Q0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI71302.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_239G1_scaffold_2523_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4621..5532
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNB2_BIFLS
L2_039_239G1_scaffold_2523_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5613..6137)
DNA (525bp) protein (175aa)
50S ribosomal protein L17 n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=RL17_BIFLO
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
rplQ; 50S ribosomal protein L17
L2_039_239G1_scaffold_2523_7
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6237..6647)
DNA (411bp) protein (137aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
DNA-directed RNA polymerase subunit alpha n=18 Tax=Bifidobacterium RepID=RPOA_BIFLO
DNA-directed RNA polymerase alpha subunit
L2_039_239G1_scaffold_2523_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6616..7095)
DNA (480bp) protein (160aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Bifidobacterium longum D2957 RepID=S3E1X8_BIFLN
DNA-directed RNA polymerase alpha subunit
L2_039_239G1_scaffold_2523_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7176..7574)
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=26 Tax=Bifidobacterium RepID=RS11_BIFLD
rpsK; SSU ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_039_239G1_scaffold_2523_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7661..7759)
DNA (99bp) protein (33aa)
30S ribosomal protein S13 n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FGN8_9BIFI
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Displaying 10 items

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