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L2_039_239G1_scaffold_1007

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_1007_1
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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286..849
DNA (564bp) protein (188aa)
alkyl hydroperoxide reductase (EC:1.11.1.15)
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AIZ15355.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AIZ15355.1};; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
Peroxiredoxin n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV21_9BIFI
L2_039_239G1_scaffold_1007_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

953..2719
DNA (1767bp) protein (589aa)
Putative alkyl hydroperoxide reductase F subunit n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XW18_9BIFI
Putative alkyl hydroperoxide reductase F subunit {ECO:0000313|EMBL:EEG70223.1}; Putative thioredoxin reductase {ECO:0000313|EMBL:BAR04464.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Alkyl hydroperoxide reductase protein F
L2_039_239G1_scaffold_1007_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2937..4205)
DNA (1269bp) protein (423aa)
Major facilitator superfamily MFS_1 n=2 Tax=Bifidobacterium longum RepID=D6ZX79_BIFLJ
Permease
Permease {ECO:0000313|EMBL:AJE06770.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_039_239G1_scaffold_1007_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4936..5220
DNA (285bp) protein (95aa)
ATP-dependent DNA helicase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GKK3_9BIFI
ATP-dependent DNA helicase
ATP-dependent DNA helicase {ECO:0000313|EMBL:AJE06768.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_039_239G1_scaffold_1007_5
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5373..5849
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P0V5_9BIFI
sodium:solute symporter
Sodium:solute symporter {ECO:0000313|EMBL:AIZ15341.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_039_239G1_scaffold_1007_6
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6145..6492
DNA (348bp) protein (116aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRF0_9BIFI
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIZ15340.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_039_239G1_scaffold_1007_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6593..7513
DNA (921bp) protein (307aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRF0_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KEF27907.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter
L2_039_239G1_scaffold_1007_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7510..8034
DNA (525bp) protein (175aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRE9_9BIFI
ABC transporter ATP-binding protein
ABC transporter permease component {ECO:0000313|EMBL:BAR04443.1}; Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEG71243.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_039_239G1_scaffold_1007_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7994..8431
DNA (438bp) protein (146aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRE9_9BIFI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEF27908.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter ATP-binding protein
L2_039_239G1_scaffold_1007_10
unknown

Not on your lists

comp(8374..8547)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_039_239G1_scaffold_1007_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8579..9184
DNA (606bp) protein (202aa)
ABC transporter, ATP-binding protein n=4 Tax=Bifidobacterium RepID=A7A2T6_BIFAD
ABC transporter ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR04442.1}; ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG71242.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_039_239G1_scaffold_1007_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9320..9757)
DNA (438bp) protein (146aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRE7_9BIFI
Acetyltransferase {ECO:0000313|EMBL:BAR04441.1}; Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG71240.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
acetyltransferase
L2_039_239G1_scaffold_1007_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9962..10663
DNA (702bp) protein (234aa)
PAP2 family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRE5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF27911.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L2_039_239G1_scaffold_1007_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10896..13325
DNA (2430bp) protein (810aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRE4_9BIFI
Beta-glucosidase {ECO:0000313|EMBL:KEF27912.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
beta-glucosidase
L2_039_239G1_scaffold_1007_15
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13318..13875
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P0W2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC17075.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
PTS cellobiose transporter subunit IIC
L2_039_239G1_scaffold_1007_16
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13945..15168)
DNA (1224bp) protein (408aa)
Aspartate transaminase {ECO:0000313|EMBL:KFI86769.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KFI86769.1};; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
aspC; aspartate aminotransferase (EC:4.4.1.14)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9H2_9BIFI
L2_039_239G1_scaffold_1007_17
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15796..16665
DNA (870bp) protein (290aa)
Extracellular solute-binding protein, family protein 3 n=3 Tax=Mycobacterium smegmatis RepID=A0QSV2_MYCS2
Amino acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:KFI86768.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
ABC transporter substrate-binding protein
L2_039_239G1_scaffold_1007_18
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16682..17491
DNA (810bp) protein (270aa)
Glutamine ABC superfamily ATP binding cassette transporter, permease protein n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FHE5_MYCSM
Amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KFI86767.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
polar amino acid ABC transporter permease
L2_039_239G1_scaffold_1007_19
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17513..18304
DNA (792bp) protein (264aa)
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KFI86766.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KFI86766.1};; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
sulfate-transporting ATPase (EC:3.6.3.25)
arginine ABC transporter ATP-binding protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A241
L2_039_239G1_scaffold_1007_20
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18383..19078
DNA (696bp) protein (232aa)
Transcriptional regulator, GntR family n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T1U3_MYCVP
GntR family transcriptional regulator {ECO:0000313|EMBL:KFJ04673.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
GntR family transcriptional regulator
L2_039_239G1_scaffold_1007_21
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19128..20216
DNA (1089bp) protein (363aa)
Acetamidase/formamidase {ECO:0000313|EMBL:KFI86764.1}; EC=3.5.1.49 {ECO:0000313|EMBL:KFI86764.1};; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
Predicted acetamidase/formamidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7N6_MICTS
acetamidase/formamidase
L2_039_239G1_scaffold_1007_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20310..21620
DNA (1311bp) protein (437aa)
Chloride transporter, ClC family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRD5_9BIFI
Chloride transporter, ClC family {ECO:0000313|EMBL:EEG71229.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04432.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
chloride channel protein
L2_039_239G1_scaffold_1007_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21729..23180)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTW2_9BIFI
Two-component sensor kinase {ECO:0000313|EMBL:BAR04430.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
histidine kinase
L2_039_239G1_scaffold_1007_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23177..23893)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q0W8_9BIFI
Two-component response regulator {ECO:0000313|EMBL:BAR04429.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
LytTR family transcriptional regulator
L2_039_239G1_scaffold_1007_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24213..24614
DNA (402bp) protein (134aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XW41_9BIFI
sugar ABC transporter ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR04428.1}; ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG71225.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Displaying 25 items

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