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L2_039_239G1_scaffold_1162

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_1162_1
unknown

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2..70
DNA (69bp) protein (23aa)

This feature has no annotations

L2_039_239G1_scaffold_1162_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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853..2043
DNA (1191bp) protein (397aa)
Aminotransferase, class I and II n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU71_BIFLJ
Aspartate aminotransferase {ECO:0000313|EMBL:KEY32058.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
class I and II aminotransferase
L2_039_239G1_scaffold_1162_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2083..3846
DNA (1764bp) protein (588aa)
Putative sugar kinase {ECO:0000313|EMBL:KFI71767.1}; EC=4.2.1.136 {ECO:0000313|EMBL:KFI71767.1};; EC=5.1.99.6 {ECO:0000313|EMBL:KFI71767.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU70_BIFLJ
hypothetical protein
L2_039_239G1_scaffold_1162_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4005..4634
DNA (630bp) protein (210aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU69_BIFLJ
HAD-superfamily hydrolase {ECO:0000313|EMBL:KFI71768.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
HAD-superfamily hydrolase
L2_039_239G1_scaffold_1162_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4736..5659
DNA (924bp) protein (308aa)
Fhu operon transcription regulator n=17 Tax=Bifidobacterium RepID=B3DS52_BIFLD
transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:KEY32929.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_039_239G1_scaffold_1162_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5814..6935)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU67_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:KFI71771.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_239G1_scaffold_1162_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7220..7408)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU66_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI71772.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_039_239G1_scaffold_1162_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7516..8211)
DNA (696bp) protein (232aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Orotate phosphoribosyltransferase n=15 Tax=Bifidobacterium RepID=PYRE_BIFLO
orotate phosphoribosyltransferase
L2_039_239G1_scaffold_1162_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8220..9191)
DNA (972bp) protein (324aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Dihydroorotate dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU64_BIFLJ
diguanylate cyclase
L2_039_239G1_scaffold_1162_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9194..10018)
DNA (825bp) protein (275aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU63_BIFLJ
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ADH00419.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_039_239G1_scaffold_1162_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10156..11109)
DNA (954bp) protein (318aa)
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Orotidine 5'-phosphate decarboxylase n=10 Tax=Bifidobacterium RepID=B3DS58_BIFLD
L2_039_239G1_scaffold_1162_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11127..12623)
DNA (1497bp) protein (499aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Dihydroorotase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU61_BIFLJ
amidohydrolase
L2_039_239G1_scaffold_1162_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12620..13039)
DNA (420bp) protein (140aa)
Aspartate transcarbamylase regulatory subunit n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU60_BIFLJ
aspartate transcarbamylase regulatory subunit
Aspartate carbamoyltransferase {ECO:0000313|EMBL:KEY32046.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L2_039_239G1_scaffold_1162_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13039..13224)
DNA (186bp) protein (62aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Aspartate carbamoyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU59_BIFLJ
pyrB; aspartate carbamoyltransferase
L2_039_239G1_scaffold_1162_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14198..14485)
DNA (288bp) protein (96aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU58_BIFLJ
(glutamate--ammonia-ligase) adenylyltransferase
Displaying 15 items

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