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L2_039_239G1_scaffold_1265

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_1265_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
Transcriptional regulatory protein C-terminal domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHZ2_9ACTN
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EBA40264.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
two component transcriptional regulator, winged helix family
L2_039_239G1_scaffold_1265_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

282..1409
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72255.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L2_039_239G1_scaffold_1265_3
unknown

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1384..1752
DNA (369bp) protein (123aa)

This feature has no annotations

L2_039_239G1_scaffold_1265_4
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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1773..2396
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:209 RepID=R6H8K9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDB33150.1}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
L2_039_239G1_scaffold_1265_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2569..3372
DNA (804bp) protein (268aa)
Trypsin n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P7_9ACTN
Trypsin {ECO:0000313|EMBL:EBA40263.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptidase S1 and S6 chymotrypsin/Hap
L2_039_239G1_scaffold_1265_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3317..3649
DNA (333bp) protein (111aa)
Trypsin n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z932_9ACTN
Trypsin {ECO:0000313|EMBL:EBA40263.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptidase S1 and S6 chymotrypsin/Hap
L2_039_239G1_scaffold_1265_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3673..3888
DNA (216bp) protein (72aa)
Trypsin n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P7_9ACTN
Trypsin {ECO:0000313|EMBL:EBA40263.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_1265_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4338..6566
DNA (2229bp) protein (743aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4Y9_9ACTN
L2_039_239G1_scaffold_1265_9
unknown

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comp(6994..8166)
DNA (1173bp) protein (391aa)

This feature has no annotations

L2_039_239G1_scaffold_1265_10
Bifidobacterium merycicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8277..9107)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6L6X1_9FIRM
Transcriptional regulator of multidrug-efflux transporter {ECO:0000313|EMBL:KFI70880.1}; TaxID=78345 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium merycicum.;"
transcriptional regulator of multidrug-efflux transporter
L2_039_239G1_scaffold_1265_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(9172..10518)
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P1_9ACTN
MATE efflux family protein {ECO:0000313|EMBL:EBA40257.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
matE; MATE efflux family protein
L2_039_239G1_scaffold_1265_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10836..11477
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP88_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75562.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_039_239G1_scaffold_1265_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11447..11728
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8N8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75562.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_039_239G1_scaffold_1265_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12106..13161
DNA (1056bp) protein (352aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBE8_9ACTN
hypothetical protein
L2_039_239G1_scaffold_1265_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13166..14470
DNA (1305bp) protein (435aa)
Molybdenum cofactor biosynthesis protein C n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8N6_9ACTN
Molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:EBA40252.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_1265_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14860..15171
DNA (312bp) protein (104aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75572.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_039_239G1_scaffold_1265_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15514..16647
DNA (1134bp) protein (378aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8M4_9ACTN
L2_039_239G1_scaffold_1265_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16647..18323
DNA (1677bp) protein (559aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZG13_9ACTN
L2_039_239G1_scaffold_1265_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18735..18878
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7M1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35688.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_039_239G1_scaffold_1265_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18886..18981
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40235.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_1265_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19000..19533
DNA (534bp) protein (178aa)
Heavy metal translocating P-type ATPase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75576.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
heavy metal translocating P-type ATPase
L2_039_239G1_scaffold_1265_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19771..20205)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8L3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40229.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_1265_23
Atopobium sp. oral taxon 199, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21909..22112
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3AL76_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EPD77094.1}; TaxID=1203602 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 199 str. F0494.;"
regulatory protein MerR
L2_039_239G1_scaffold_1265_24
Coriobacteriaceae bacterium 68-1-3, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22127..24070
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3A4E6_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC12266.1}; TaxID=1531429 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae.;" source="Coriobacteriaceae bacterium 68-1-3.;"
L2_039_239G1_scaffold_1265_25
unknown

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24084..24929
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZC4_BIFBP
hypothetical protein
L2_039_239G1_scaffold_1265_26
unknown

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24949..25305
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZC5_BIFBP
hypothetical protein
L2_039_239G1_scaffold_1265_27
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25408..25713
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZC6_BIFBP
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK44353.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L2_039_239G1_scaffold_1265_28
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26022..26573
DNA (552bp) protein (184aa)
MobC Mobilization protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZC7_BIFBP
mobC; mobilization protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK44354.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L2_039_239G1_scaffold_1265_29
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26573..27577
DNA (1005bp) protein (335aa)
Mobilization protein n=1 Tax=Bifidobacterium animalis subsp. lactis ATCC 27673 RepID=U3QB39_BIFAN
mobilization protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK44355.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
Displaying 29 items

View Taxonomy