ggKbase home page

L2_039_239G1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_22_1
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115..2415)
DNA (2301bp) protein (767aa)
Putative guanosine 3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y381_9BURK
Putative guanosine 3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:EFL83427.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
spoT; guanosine-3', 5'-bis(diphosphate)3'-pyrophosphohydrolase
L2_039_239G1_scaffold_22_2
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2526..2726)
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
DNA-directed RNA polymerase subunit omega n=4 Tax=Proteobacteria RepID=D9Y382_9BURK
DNA-directed RNA polymerase subunit omega
L2_039_239G1_scaffold_22_3
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2745..3389)
DNA (645bp) protein (215aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=2 Tax=Burkholderiales RepID=D9Y383_9BURK
L2_039_239G1_scaffold_22_4
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3421..4389)
DNA (969bp) protein (323aa)
Transaldolase {ECO:0000256|RuleBase:RU004155, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|RuleBase:RU004155, ECO:0000256|SAAS:SAAS00118670};; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
transaldolase B (EC:2.2.1.2)
Transaldolase n=2 Tax=Burkholderiales RepID=D9Y384_9BURK
L2_039_239G1_scaffold_22_5
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4557..5048
DNA (492bp) protein (164aa)
Uncharacterized protein n=3 Tax=Burkholderiales RepID=D9Y385_9BURK
Conserved domain protein {ECO:0000313|EMBL:CCX85782.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
membrane protein
L2_039_239G1_scaffold_22_6
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5480..6670
DNA (1191bp) protein (397aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y386_9BURK
L2_039_239G1_scaffold_22_7
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6667..7269
DNA (603bp) protein (201aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
phosphoheptose isomerase (EC:5.3.1.-)
Phosphoheptose isomerase n=2 Tax=Burkholderiales RepID=D9Y387_9BURK
L2_039_239G1_scaffold_22_8
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7276..10500
DNA (3225bp) protein (1075aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=2 Tax=Burkholderiales RepID=D9Y388_9BURK
L2_039_239G1_scaffold_22_9
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10555..11559
DNA (1005bp) protein (335aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y389_9BURK
L2_039_239G1_scaffold_22_10
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11704..12177
DNA (474bp) protein (158aa)
Transcription elongation factor GreA n=2 Tax=Burkholderiales RepID=D9Y390_9BURK
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
transcription elongation factor GreA
L2_039_239G1_scaffold_22_11
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12199..12738)
DNA (540bp) protein (180aa)
RNA-binding protein, YhbY family n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y391_9BURK
RNA-binding protein, YhbY family {ECO:0000313|EMBL:EFL83437.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L2_039_239G1_scaffold_22_12
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12777..13421
DNA (645bp) protein (215aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
Ribosomal RNA large subunit methyltransferase E n=3 Tax=Proteobacteria RepID=D9Y392_9BURK
ftsJ-like methyltransferase family protein
L2_039_239G1_scaffold_22_13
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(13519..14082)
DNA (564bp) protein (188aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=F3QH32_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDA42819.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
6-pyruvoyl-tetrahydropterin synthase
L2_039_239G1_scaffold_22_14
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14124..14516)
DNA (393bp) protein (131aa)
Transcriptional regulator, Fur family n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y394_9BURK
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EFL83440.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
ferric uptake regulator
L2_039_239G1_scaffold_22_15
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14672..15631)
DNA (960bp) protein (320aa)
Tat pathway signal sequence domain protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y395_9BURK
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFL83441.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L2_039_239G1_scaffold_22_16
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15821..16726
DNA (906bp) protein (302aa)
LysR substrate binding domain protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y396_9BURK
LysR substrate binding domain protein {ECO:0000313|EMBL:EFL83442.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
LysR family transcriptional regulator
L2_039_239G1_scaffold_22_17
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16823..20269
DNA (3447bp) protein (1149aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y397_9BURK
L2_039_239G1_scaffold_22_18
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20463..22499
DNA (2037bp) protein (679aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QH27_9BURK
Cell division protein FtsH
L2_039_239G1_scaffold_22_19
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

22660..23235
DNA (576bp) protein (192aa)
Transcription elongation factor GreB n=3 Tax=Proteobacteria RepID=D9Y399_9BURK
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
putative transcription elongation factor
L2_039_239G1_scaffold_22_20
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23268..24332
DNA (1065bp) protein (355aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y3A0_9BURK
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L2_039_239G1_scaffold_22_21
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24329..25462
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=2 Tax=Burkholderiales RepID=D9Y3A1_9BURK
L2_039_239G1_scaffold_22_22
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25738..26088
DNA (351bp) protein (117aa)
Preprotein translocase, YajC subunit n=3 Tax=Burkholderiales RepID=D9Y3A2_9BURK
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CCX88205.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
preprotein translocase subunit YajC
L2_039_239G1_scaffold_22_23
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26223..28091
DNA (1869bp) protein (623aa)
Protein translocase subunit SecD n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5EJI5_9BURK
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
secD; preprotein translocase subunit SecD
L2_039_239G1_scaffold_22_24
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28094..29029
DNA (936bp) protein (312aa)
Protein-export membrane protein SecF n=2 Tax=Burkholderiales RepID=D9Y3A4_9BURK
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
secF; preprotein translocase subunit SecF
L2_039_239G1_scaffold_22_25
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29161..29718
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=D9Y3A5_9BURK
Putative membrane protein {ECO:0000313|EMBL:CCX88209.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L2_039_239G1_scaffold_22_26
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29681..30013
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=D9Y3A6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL83452.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L2_039_239G1_scaffold_22_27
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30092..30754)
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=4 Tax=Proteobacteria RepID=D9Y3A7_9BURK
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX88211.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
transcriptional regulator, LuxR family
L2_039_239G1_scaffold_22_28
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30837..31886)
DNA (1050bp) protein (350aa)
Hydrogenase expression/formation protein HypE n=2 Tax=Burkholderiales RepID=D9Y3A8_9BURK
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EFL83454.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hupE_[H]; [NiFe] hydrogenase metallocenter assembly protein HypE
L2_039_239G1_scaffold_22_29
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31906..33012)
DNA (1107bp) protein (369aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y3A9_9BURK
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:EFL83455.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hydrogenase formation protein HypD
L2_039_239G1_scaffold_22_30
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33009..33242)
DNA (234bp) protein (78aa)
Hydrogenase assembly chaperone HypC/HupF n=3 Tax=Burkholderiales RepID=D9Y3B0_9BURK
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:EGG57596.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
hypC; hydrogenase assembly chaperone HypC/HupF
Displaying items 1-30 of 173 in total

View Taxonomy