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L2_039_239G1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_87_1
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..249)
DNA (249bp) protein (83aa)
tufA; translation elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D327_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L2_039_239G1_scaffold_87_2
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(307..2382)
DNA (2076bp) protein (692aa)
Elongation factor G n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D3V6_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
translation elongation factor G
L2_039_239G1_scaffold_87_3
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2405..2875)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=2 Tax=Veillonella RepID=K9DJG6_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
30S ribosomal protein S7
L2_039_239G1_scaffold_87_4
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2921..3295)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D6Y5_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
30S ribosomal protein S12
L2_039_239G1_scaffold_87_5
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3373..3618)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DNJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78950.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
ribosomal protein L7Ae-like protein
L2_039_239G1_scaffold_87_6
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3975..8186)
DNA (4212bp) protein (1404aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D324_9FIRM
DNA-directed RNA polymerase subunit beta'
L2_039_239G1_scaffold_87_7
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8220..12371)
DNA (4152bp) protein (1384aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D3V2_9FIRM
DNA-directed RNA polymerase subunit beta
L2_039_239G1_scaffold_87_8
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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12887..13081
DNA (195bp) protein (65aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DJG2_9FIRM
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EKU78947.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
thiG; Thiazole biosynthesis protein thiG
L2_039_239G1_scaffold_87_9
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13081..13875
DNA (795bp) protein (265aa)
thiF; thiamine biosynthesis protein ThiF (EC:2.7.7.-)
Thiamine biosynthesis protein ThiF n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D6Y3_9FIRM
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EKU78946.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L2_039_239G1_scaffold_87_10
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13877..14698
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DNI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78945.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
putative enzyme of thiazole biosynthesis
L2_039_239G1_scaffold_87_11
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14745..15983
DNA (1239bp) protein (413aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D321_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EKU78944.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
thiazole biosynthesis protein ThiH
L2_039_239G1_scaffold_87_12
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15964..16635
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D3V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78943.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
thiamine-phosphate pyrophosphorylase
L2_039_239G1_scaffold_87_13
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16858..18273)
DNA (1416bp) protein (472aa)
Aspartate ammonia-lyase n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DJF6_9FIRM
Aspartate ammonia-lyase {ECO:0000313|EMBL:EKU78942.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
fumarate lyase
L2_039_239G1_scaffold_87_14
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18839..19327)
DNA (489bp) protein (163aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D6X8_9FIRM
FKBP-type peptidylprolyl isomerase
L2_039_239G1_scaffold_87_15
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19327..20934)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DNI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78940.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
multicopper oxidase
L2_039_239G1_scaffold_87_16
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21804..23129)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D317_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78939.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L2_039_239G1_scaffold_87_17
unknown

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comp(23277..23510)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_039_239G1_scaffold_87_18
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23525..23668)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D3U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78938.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L2_039_239G1_scaffold_87_19
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23677..24102)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DJF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78937.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L2_039_239G1_scaffold_87_20
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24644..25684)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D6X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78936.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L2_039_239G1_scaffold_87_21
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25644..32501)
DNA (6858bp) protein (2286aa)
Hemeagluttinin repeat protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UT29_9FIRM
Hemeagluttinin repeat protein {ECO:0000313|EMBL:ERT62451.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
hypothetical protein
L2_039_239G1_scaffold_87_22
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32532..34211)
DNA (1680bp) protein (560aa)
Hemolysin secretion/activation protein, ShlB/FhaC/HecB family n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UT39_9FIRM
Hemolysin secretion/activation protein, ShlB/FhaC/HecB family {ECO:0000313|EMBL:ERT62461.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
Polypeptide-transport-associated domain protein ShlB-type
L2_039_239G1_scaffold_87_23
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(34720..35370)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D3U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78933.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
transcriptional regulator XRE family
L2_039_239G1_scaffold_87_24
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

35500..35589
DNA (90bp) protein (30aa)
ICEBs1 excisionase family protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7USV6_9FIRM
ICEBs1 excisionase family protein {ECO:0000313|EMBL:ERT62415.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
L2_039_239G1_scaffold_87_25
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

35786..36367
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D6X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78931.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
Lj928 prophage protein
L2_039_239G1_scaffold_87_26
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

37351..38202
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DNH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78930.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
relaxase/mobilization nuclease domain-containing protein
L2_039_239G1_scaffold_87_27
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

38217..38687
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D312_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78929.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L2_039_239G1_scaffold_87_28
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

38864..39769
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D3U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78928.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
phage integrase
L2_039_239G1_scaffold_87_29
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(39878..40249)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=2 Tax=Veillonella RepID=K9DJE3_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
50S ribosomal protein L7/L12
L2_039_239G1_scaffold_87_30
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(40302..40805)
DNA (504bp) protein (168aa)
50S ribosomal protein L10 n=2 Tax=Veillonella RepID=K9D6X0_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
50S ribosomal protein L10
Displaying items 1-30 of 153 in total

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