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L2_039_239G1_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_110_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)
gap; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde 3-phosphate dehydrogenase {ECO:0000313|EMBL:BAR03925.1}; Glyceraldehyde-3-phosphate dehydrogenase, type I {ECO:0000313|EMBL:EEG71024.1}; EC=1.2.1.- {ECO:0000313|EMBL:EEG71024.1};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P936_9BIFI
L2_039_239G1_scaffold_110_2
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(367..1116)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NV06_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15020.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
thiamine pyrophosphokinase
L2_039_239G1_scaffold_110_3
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1323..2126
DNA (804bp) protein (268aa)
Translation initiation factor IF-3 n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P2V4_9BIFI
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
infC; translation initiation factor IF-3
L2_039_239G1_scaffold_110_4
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2145..2339
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=3 Tax=Bifidobacterium RepID=B6XTB6_9BIFI
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L2_039_239G1_scaffold_110_5
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2400..2747)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NNG0_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF21957.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
L2_039_239G1_scaffold_110_6
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2852..3805
DNA (954bp) protein (318aa)
Tyrosine recombinase XerD n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P933_9BIFI
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
recombinase XerC
L2_039_239G1_scaffold_110_7
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3893..4732
DNA (840bp) protein (280aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Bifidobacterium RepID=C0BS67_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15015.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_039_239G1_scaffold_110_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4898..5695
DNA (798bp) protein (266aa)
Hydrolase, NUDIX family n=2 Tax=Bifidobacterium RepID=C0BS66_9BIFI
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KEF28194.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ADP-ribose pyrophosphatase
L2_039_239G1_scaffold_110_9
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5786..7144
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NS85_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15013.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
putative sugar transporter
L2_039_239G1_scaffold_110_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7362..9293
DNA (1932bp) protein (644aa)
GTP-binding protein TypA n=2 Tax=Bifidobacterium RepID=C0BS64_9BIFI
GTP-binding protein TypA
GTP-binding protein {ECO:0000313|EMBL:BAR03916.1}; GTP-binding protein TypA {ECO:0000313|EMBL:EEG71014.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_039_239G1_scaffold_110_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9377..9943
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BS63_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF28197.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
alcohol dehydrogenase
L2_039_239G1_scaffold_110_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10011..10991
DNA (981bp) protein (327aa)
Prephenate dehydratase {ECO:0000313|EMBL:EEG71012.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EEG71012.1};; Putative chorismate mutase {ECO:0000313|EMBL:BAR03914.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Prephenate dehydratase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS62_9BIFI
chorismate mutase
L2_039_239G1_scaffold_110_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10985..12025
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P2U5_9BIFI
Prephenate dehydrogenase {ECO:0000313|EMBL:KEF28199.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
prephenate dehydrogenase
L2_039_239G1_scaffold_110_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12030..12287)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS60_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71010.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_039_239G1_scaffold_110_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12466..13392
DNA (927bp) protein (309aa)
Tyrosine recombinase XerC n=2 Tax=Bifidobacterium RepID=C0BS59_9BIFI
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
recombinase XerC
L2_039_239G1_scaffold_110_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13695..14123
DNA (429bp) protein (143aa)
ABC-type transpoter n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPG8_9BIFI
ABC-type transpoter
ABC-type transpoter {ECO:0000313|EMBL:AII76526.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_039_239G1_scaffold_110_17
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14185..15165
DNA (981bp) protein (327aa)
ABC-type transpoter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2B0_BIFAA
dppA2; ABC-type transporter
ABC-type transpoter {ECO:0000313|EMBL:CCY19148.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_039_239G1_scaffold_110_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15494..15988
DNA (495bp) protein (165aa)
Probable permease protein of ABC-transporter for peptides n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2A9_BIFAA
putative permease protein of ABC-transporter for peptides
Peptide ABC transporter permease {ECO:0000313|EMBL:AII76525.1}; Putative permease protein of ABC-transporter for peptides {ECO:0000313|EMBL:AJE06175.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_039_239G1_scaffold_110_19
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15946..16335
DNA (390bp) protein (130aa)
Probable permease protein of ABC-transporter for peptides n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2A9_BIFAA
dppB; peptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:KFI97695.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_039_239G1_scaffold_110_20
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16356..17324
DNA (969bp) protein (323aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTD3_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EEB21539.1}; Dipeptide ABC transporter permease component {ECO:0000313|EMBL:BAR02137.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
peptide ABC transporter permease
L2_039_239G1_scaffold_110_21
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17346..19355
DNA (2010bp) protein (670aa)
Putative phosphonate C-P lyase system protein PhnK n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTD4_9BIFI
Dipeptide ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR02136.1}; Putative phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:EEB21540.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
dipeptide transport ATP-binding protein
L2_039_239G1_scaffold_110_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19436..20296
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6NS65_9BIFI
Exodeoxyribonuclease III {ECO:0000313|EMBL:KEF28207.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
exodeoxyribonuclease III
L2_039_239G1_scaffold_110_23
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20414..21244
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BS52_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14997.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_039_239G1_scaffold_110_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21271..22017
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS51_9BIFI
Zinc ABC transporter permease {ECO:0000313|EMBL:KEF28209.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
zinc ABC transporter permease
L2_039_239G1_scaffold_110_25
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22017..23282
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUV9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14995.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
RNA methyltransferase
L2_039_239G1_scaffold_110_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23285..23866
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BS49_9BIFI
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEF28211.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
sugar ABC transporter substrate-binding protein
L2_039_239G1_scaffold_110_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24003..26489
DNA (2487bp) protein (829aa)
E1-E2 ATPase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS48_9BIFI
E1-E2 ATPase {ECO:0000313|EMBL:EEG70998.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
haloacid dehalogenase
L2_039_239G1_scaffold_110_28
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26559..29261
DNA (2703bp) protein (901aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
acnA; aconitate hydratase (EC:4.2.1.3)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PZ57_9BIFI
L2_039_239G1_scaffold_110_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29350..30729)
DNA (1380bp) protein (460aa)
MATE efflux family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS46_9BIFI
MATE efflux family protein {ECO:0000313|EMBL:EEG70996.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR03898.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Na+ driven multidrug efflux pump
L2_039_239G1_scaffold_110_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30767..31414)
DNA (648bp) protein (216aa)
lacA; galactoside O-acetyltransferase (EC:2.3.1.18)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BS45_9BIFI
Galactoside O-acetyltransferase {ECO:0000313|EMBL:KEF28215.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Displaying items 1-30 of 104 in total

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