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L2_039_239G1_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_133_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..800
DNA (798bp) protein (266aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
pfk; 6-phosphofructokinase (EC:2.7.1.11)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8WDW4_9CLOT
L2_039_239G1_scaffold_133_2
unknown

Not on your lists

896..1576
DNA (681bp) protein (227aa)

This feature has no annotations

L2_039_239G1_scaffold_133_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

1584..2243
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IWN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41116.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_039_239G1_scaffold_133_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2354..2878
DNA (525bp) protein (175aa)
Sigma-70 region 2 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BZD6_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:ERI77163.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_039_239G1_scaffold_133_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2904..4199
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57580.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_239G1_scaffold_133_6
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

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4361..5683
DNA (1323bp) protein (441aa)
Recombination factor protein RarA n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3E1_9BACT
Recombination factor protein RarA {ECO:0000313|EMBL:EFB91215.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W5455.;"
recombination factor protein RarA
L2_039_239G1_scaffold_133_7
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5697..6074
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FIA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS69806.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L2_039_239G1_scaffold_133_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6121..7782)
DNA (1662bp) protein (554aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine-tRNA ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8X0_9CLOT
L2_039_239G1_scaffold_133_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7810..9462)
DNA (1653bp) protein (551aa)
Glutamate-tRNA ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W932_9CLOT
Glutamate-tRNA ligase {ECO:0000313|EMBL:EOQ41353.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
L2_039_239G1_scaffold_133_10
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9589..10131)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI0003669FEE
RDD family protein
RDD family protein {ECO:0000313|EMBL:CDE22222.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
L2_039_239G1_scaffold_133_11
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10128..10913)
DNA (786bp) protein (262aa)
Putative bacteriochlorophyll 4-vinyl reductase n=1 Tax=Mitsuokella sp. oral taxon 131 str. W9106 RepID=U2UQQ6_9FIRM
Putative bacteriochlorophyll 4-vinyl reductase {ECO:0000313|EMBL:ERL05457.1}; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
HAD-superfamily hydrolase, subfamily IIB
L2_039_239G1_scaffold_133_12
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10915..12177)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBB6_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
PTS system, lactose/cellobiose-family IICcomponent
L2_039_239G1_scaffold_133_13
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12245..13648)
DNA (1404bp) protein (468aa)
pagL1; phospho-alpha-glucosidase PagL (EC:3.2.1.-)
Phospho-alpha-glucosidase pagL n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBB7_9FIRM
Phospho-alpha-glucosidase pagL {ECO:0000313|EMBL:EFW04652.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L2_039_239G1_scaffold_133_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13860..14594)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GBB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04653.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
SIS domain-containing protein
L2_039_239G1_scaffold_133_15
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14664..14966
DNA (303bp) protein (101aa)
Phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SN96_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFP61015.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
L2_039_239G1_scaffold_133_16
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

14967..15293
DNA (327bp) protein (109aa)
PTS family cellobiose porter component IIA (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XHT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15073.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L2_039_239G1_scaffold_133_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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15457..15927
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46475.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_039_239G1_scaffold_133_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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15933..17264
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46474.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
multi antimicrobial extrusion protein MatE
L2_039_239G1_scaffold_133_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17350..17898)
DNA (549bp) protein (183aa)
Membrane spanning protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3M3_9CLOT
Membrane spanning protein {ECO:0000313|EMBL:EGB91287.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
sporulation protein YtaF
L2_039_239G1_scaffold_133_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17988..18848)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W590_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39869.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transcriptional regulator, AraC family
L2_039_239G1_scaffold_133_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19017..20420
DNA (1404bp) protein (468aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
uronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4S5_9CLOT
L2_039_239G1_scaffold_133_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20465..21499
DNA (1035bp) protein (345aa)
DctP family TRAP transporter solute receptor n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4L0_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:EOQ39865.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
TRAP dicarboxylate transporter subunit DctP
L2_039_239G1_scaffold_133_23
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21516..22007
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W583_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39864.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L2_039_239G1_scaffold_133_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22011..23312
DNA (1302bp) protein (434aa)
TRAP transporter, DctM subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4R9_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EOQ39863.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
TRAP dicarboxylate transporter subunit DctM
L2_039_239G1_scaffold_133_25
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23363..23758)
DNA (396bp) protein (132aa)
Transposase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W812_DESOD
transposase
Transposase {ECO:0000313|EMBL:AET66438.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L2_039_239G1_scaffold_133_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24492..24869
DNA (378bp) protein (126aa)
Putative endoribonuclease L-PSP n=1 Tax=Anaerotruncus colihominis DSM 17241 PF64_9FIRM">RepID=B0PF64_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EDS09997.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
endoribonuclease L-PSP
L2_039_239G1_scaffold_133_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25005..26660
DNA (1656bp) protein (552aa)
Beta-eliminating lyase n=1 Tax=Anaerotruncus colihominis DSM 17241 PF63_9FIRM">RepID=B0PF63_9FIRM
Beta-eliminating lyase {ECO:0000313|EMBL:EDS09996.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
beta-eliminating lyase
L2_039_239G1_scaffold_133_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26846..28240
DNA (1395bp) protein (465aa)
Transporter n=2 Tax=Clostridiales RepID=H1CKH3_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
sodium-dependent tryptophan transporter
L2_039_239G1_scaffold_133_29
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29003..30205)
DNA (1203bp) protein (401aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate transaminase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1Y5_9CLOT
Adenosylmethionine-8-amino-7-oxononanoate transaminase {ECO:0000313|EMBL:EOQ37167.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_133_30
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30223..30906)
DNA (684bp) protein (228aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MIN7_9FIRM
Displaying items 1-30 of 123 in total

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