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L2_039_239G1_scaffold_148

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_148_1
unknown

Not on your lists

comp(25..180)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_039_239G1_scaffold_148_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(268..528)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YX59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16608.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_039_239G1_scaffold_148_3
unknown

Not on your lists

comp(800..1096)
DNA (297bp) protein (99aa)

This feature has no annotations

L2_039_239G1_scaffold_148_4
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1338..2393)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B7 RepID=R0CQJ9_9CLOT
ParB-like nuclease domain {ECO:0000313|EMBL:CCX98723.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ParB-like nuclease domain.
L2_039_239G1_scaffold_148_5
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2383..3153)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R0D0R5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98724.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ATPases involved in chromosome partitioning
L2_039_239G1_scaffold_148_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3150..3740)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XBU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12821.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_039_239G1_scaffold_148_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3768..4217)
DNA (450bp) protein (150aa)
Ribonuclease H (EC:3.1.26.4)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YYI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12827.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L2_039_239G1_scaffold_148_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4193..4987)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R5D3_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03339.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_039_239G1_scaffold_148_9
unknown

Not on your lists

comp(5164..5319)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_039_239G1_scaffold_148_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5739..5849)
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KVQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34278.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_039_239G1_scaffold_148_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5869..6036)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AP95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34604.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_039_239G1_scaffold_148_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6223..6681
DNA (459bp) protein (153aa)
XRE family Transcriptional regulator n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GTT3_CLOSY
XRE family Transcriptional regulator {ECO:0000313|EMBL:EGA91812.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Helix-turn-helix.
L2_039_239G1_scaffold_148_13
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6971..7906
DNA (936bp) protein (312aa)
BRCA1 protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q0N3_9FIRM
BRCA1 protein {ECO:0000313|EMBL:EKY21451.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
3'-5' exonuclease
L2_039_239G1_scaffold_148_14
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7988..8188
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0127 RepID=R1YHA8_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELA76142.1}; TaxID=1138891 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0011.;"
hypothetical protein
L2_039_239G1_scaffold_148_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8801..10369
DNA (1569bp) protein (523aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=A8S0M4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14107.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
recombinase
L2_039_239G1_scaffold_148_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10546..11448)
DNA (903bp) protein (301aa)
YaeC family lipoprotein n=4 Tax=Clostridium RepID=N9X814_9CLOT
YaeC family lipoprotein {ECO:0000313|EMBL:ENZ11456.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
NLPA lipoprotein
L2_039_239G1_scaffold_148_17
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11505..12170)
DNA (666bp) protein (222aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D314_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG54281.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
binding-protein-dependent transport system inner membrane protein
L2_039_239G1_scaffold_148_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12173..13222)
DNA (1050bp) protein (350aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETM4_9FIRM
ABC transporter
L2_039_239G1_scaffold_148_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13636..15039)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41857.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dipeptidase
L2_039_239G1_scaffold_148_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15066..15518)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKW0_9CLOT
Yqey-like protein {ECO:0000313|EMBL:KJJ69010.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_039_239G1_scaffold_148_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15560..17164)
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIG3_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptide chain release factor 3
L2_039_239G1_scaffold_148_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17223..18425)
DNA (1203bp) protein (401aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41862.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_039_239G1_scaffold_148_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18522..19289
DNA (768bp) protein (256aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Type III pantothenate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5II70_9CLOT
transcriptional activator, Baf family
L2_039_239G1_scaffold_148_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19702..20478
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=4 Tax=Clostridium bolteae RepID=A8RI17_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L2_039_239G1_scaffold_148_25
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20540..21319)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FCE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01284.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
aminoglycoside phosphotransferase
L2_039_239G1_scaffold_148_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21546..21842)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FCE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18109.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_039_239G1_scaffold_148_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21802..21930)
DNA (129bp) protein (43aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=1 Tax=Clostridium bolteae 90B8 RepID=R0AQB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18109.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_039_239G1_scaffold_148_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22057..22254
DNA (198bp) protein (66aa)
AraC family transcriptional regulator n=3 Tax=Clostridium RepID=N9YM82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18111.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
AraC family transcriptional regulator
L2_039_239G1_scaffold_148_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22347..23330
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ETK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61350.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_039_239G1_scaffold_148_30
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23422..24162)
DNA (741bp) protein (247aa)
RNA polymerase sigma factor n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKU0_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
Displaying items 1-30 of 92 in total

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