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L2_039_239G1_scaffold_173

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_173_1
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..398)
DNA (396bp) protein (132aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LPI4_9FIRM
Signal transduction histidine kinase
L2_039_239G1_scaffold_173_2
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1296..2087)
DNA (792bp) protein (264aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6B0_9CLOT
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:EFE14098.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
phage/plasmid primase, P4 family, C-terminal domain
L2_039_239G1_scaffold_173_3
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2366..3310
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8U0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36132.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L2_039_239G1_scaffold_173_4
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3455..3874
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36133.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L2_039_239G1_scaffold_173_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3878..4456
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37921.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_039_239G1_scaffold_173_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4661..6631
DNA (1971bp) protein (657aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHQ46911.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Predicted ATP-dependent endonuclease of the OLD family
L2_039_239G1_scaffold_173_7
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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6645..8402
DNA (1758bp) protein (586aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T7_9CLOT
UvrD/REP helicase
Tax=GWF2_Clostridiales_38_85_curated
L2_039_239G1_scaffold_173_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8458..9513)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ37118.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
type II restriction enzyme
L2_039_239G1_scaffold_173_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9500..11302)
DNA (1803bp) protein (601aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I8T5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ37119.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L2_039_239G1_scaffold_173_10
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11318..12955)
DNA (1638bp) protein (546aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Blautia sp. KLE 1732 RepID=U2CJ71_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ERI90559.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_039_239G1_scaffold_173_11
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12959..13906)
DNA (948bp) protein (316aa)
Uncharacterized domain HDIG n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LPG9_9FIRM
uncharacterized domain HDIG
Uncharacterized domain HDIG {ECO:0000313|EMBL:CBL18470.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_039_239G1_scaffold_173_12
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13890..14039)
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2ECW6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18469.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_039_239G1_scaffold_173_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14214..16595
DNA (2382bp) protein (794aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Endonuclease MutS2 n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LPG7_9FIRM
MutS2 family protein
L2_039_239G1_scaffold_173_14
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16611..17312
DNA (702bp) protein (234aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H1W6_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDE33330.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_039_239G1_scaffold_173_15
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17309..18718
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LPG5_9FIRM
Signal transduction histidine kinase
L2_039_239G1_scaffold_173_16
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18820..19320)
DNA (501bp) protein (167aa)
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=3 Tax=Clostridiales RepID=D4LPG4_9FIRM
L2_039_239G1_scaffold_173_17
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19391..20002)
DNA (612bp) protein (204aa)
Hydrogenase maturation factor n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H555_9FIRM
Hydrogenase maturation factor {ECO:0000313|EMBL:CDE33327.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Hydrogenase maturation factor
L2_039_239G1_scaffold_173_18
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20013..20120)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H1W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33325.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L2_039_239G1_scaffold_173_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20107..21792)
DNA (1686bp) protein (562aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H2Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33323.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_039_239G1_scaffold_173_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22015..22695
DNA (681bp) protein (227aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CJ80_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:ERI90569.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L2_039_239G1_scaffold_173_21
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22692..24515)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H1V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33320.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L2_039_239G1_scaffold_173_22
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24618..24917)
DNA (300bp) protein (100aa)
Thioredoxin n=2 Tax=Clostridiales RepID=R7H2Y1_9FIRM
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ERI90571.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_039_239G1_scaffold_173_23
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24967..25869)
DNA (903bp) protein (301aa)
Thioredoxin reductase (EC:1.8.1.9)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Blautia sp. KLE 1732 RepID=U2E890_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERI90572.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_039_239G1_scaffold_173_24
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26182..27366
DNA (1185bp) protein (395aa)
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family n=3 Tax=Clostridiales PF8_9FIRM">RepID=D4LPF8_9FIRM
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family {ECO:0000313|EMBL:CBL18459.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_039_239G1_scaffold_173_25
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27674..28753)
DNA (1080bp) protein (360aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. SR1/5 PF7_9FIRM">RepID=D4LPF7_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL18458.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_039_239G1_scaffold_173_26
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28916..29605
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 PF6_9FIRM">RepID=D4LPF6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18457.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_039_239G1_scaffold_173_27
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30010..31194)
DNA (1185bp) protein (395aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) n=2 Tax=Clostridiales PF5_9FIRM">RepID=D4LPF5_9FIRM
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:ERI90577.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_039_239G1_scaffold_173_28
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31233..31946)
DNA (714bp) protein (238aa)
IMP cyclohydrolase-like protein n=2 Tax=Clostridiales PF4_9FIRM">RepID=D4LPF4_9FIRM
IMP cyclohydrolase-like protein.
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:ERI90578.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_039_239G1_scaffold_173_29
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32212..32886)
DNA (675bp) protein (225aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Blautia sp. KLE 1732 RepID=U2CJ91_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ERI90579.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
N-acetylmuramoyl-L-alanine amidase
L2_039_239G1_scaffold_173_30
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33041..34495)
DNA (1455bp) protein (485aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Ruminococcus PF3_9FIRM">RepID=D4LPF3_9FIRM
Displaying items 1-30 of 66 in total

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