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L2_039_239G1_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_179_1
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2..532
DNA (531bp) protein (177aa)
Transcriptional regulator, TetR family n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VV30_THESW
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:ETO37153.1}; TaxID=1421016 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium aotearoense SCUT27.;"
L2_039_239G1_scaffold_179_2
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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732..1205
DNA (474bp) protein (158aa)
Glyoxalase family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZC7_9CLOT
Glyoxalase family protein {ECO:0000313|EMBL:EEG74505.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
glyoxalase
L2_039_239G1_scaffold_179_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1208..1930
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VU76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36004.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
alpha/beta hydrolase fold protein
L2_039_239G1_scaffold_179_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1936..3102
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZ55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37858.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Aspartate/tyrosine/aromatic aminotransferase
L2_039_239G1_scaffold_179_5
Brochothrix thermosphacta, Brochothrix, Bacillales, Bacilli, Firmicutes, Bacteria

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3112..3495
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZGQ8_9CLOT
GloA protein {ECO:0000313|EMBL:EUJ35003.1}; TaxID=1121126 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Brochothrix.;" source="Brochothrix thermosphacta DSM 20171 = FSL F6-1036.;"
glyoxalase
L2_039_239G1_scaffold_179_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3532..4281
DNA (750bp) protein (250aa)
Exodeoxyribonuclease III (Xth) n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3Y1_9CLOT
Exodeoxyribonuclease III (Xth) {ECO:0000313|EMBL:EOQ37857.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_039_239G1_scaffold_179_7
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4281..4670
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AIT0_PSEF1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF22815.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 12-X).;"
L2_039_239G1_scaffold_179_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4714..5652)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37276.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Predicted permeases
L2_039_239G1_scaffold_179_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5782..6915
DNA (1134bp) protein (378aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37275.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_179_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7016..7426
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37274.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_039_239G1_scaffold_179_11
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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7909..8166
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H0T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30370.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L2_039_239G1_scaffold_179_12
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8163..8552
DNA (390bp) protein (130aa)
Putative ATP synthase protein I n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTN9_CLOSD
putative ATP synthase protein I
Putative ATP synthase protein I {ECO:0000313|EMBL:CBH22243.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
L2_039_239G1_scaffold_179_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8549..9268
DNA (720bp) protein (240aa)
F0F1-type ATP synthase, subunit a (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY98_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_179_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9335..9598
DNA (264bp) protein (88aa)
ATP synthase F0, C subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWZ9_9CLOT
ATP synthase F0, C subunit {ECO:0000313|EMBL:EOQ37270.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
ATP synthase F0 subunit C
L2_039_239G1_scaffold_179_15
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9658..10155
DNA (498bp) protein (166aa)
ATP synthase F0 subcomplex B subunit (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXS8_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_179_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10160..10702
DNA (543bp) protein (181aa)
F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXH2_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_179_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10719..12224
DNA (1506bp) protein (502aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
atpA; ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W285_9CLOT
L2_039_239G1_scaffold_179_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12246..13112
DNA (867bp) protein (289aa)
atpG; F1 sector of membrane-bound ATP synthase, gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY93_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_179_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13139..14536
DNA (1398bp) protein (466aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
atpD; F1 sector of membrane-bound ATP synthase, beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWZ2_9CLOT
L2_039_239G1_scaffold_179_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14538..14939
DNA (402bp) protein (134aa)
atpC; AtpC (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXS2_9CLOT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_179_21
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15010..15180)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9Y4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31739.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L2_039_239G1_scaffold_179_22
unknown

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15286..15513
DNA (228bp) protein (76aa)

This feature has no annotations

L2_039_239G1_scaffold_179_23
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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15618..16307
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HA43_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS25559.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
hypothetical protein
L2_039_239G1_scaffold_179_24
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16544..20251
DNA (3708bp) protein (1236aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5G4_9CLOT
L2_039_239G1_scaffold_179_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20305..23838
DNA (3534bp) protein (1178aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1H3_9CLOT
L2_039_239G1_scaffold_179_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24041..24283
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W094_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38380.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative ribosomal protein L7Ae-like
L2_039_239G1_scaffold_179_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24351..24770
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W106_9CLOT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
SSU ribosomal protein S12P
L2_039_239G1_scaffold_179_28
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24962..25432
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0L6_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
rpsG; 30S ribosomal protein S7
L2_039_239G1_scaffold_179_29
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25469..27571
DNA (2103bp) protein (701aa)
Elongation factor G n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5F8_9CLOT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
translation elongation factor G
L2_039_239G1_scaffold_179_30
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27653..28858
DNA (1206bp) protein (402aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1G6_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Displaying items 1-30 of 79 in total

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