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L2_039_239G1_scaffold_216

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_216_1
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..327)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Oribacterium RepID=G9WPA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10183.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
Transcriptional regulators
L2_039_239G1_scaffold_216_2
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(516..8078)
DNA (7563bp) protein (2521aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UBB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77391.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
putative helicase
L2_039_239G1_scaffold_216_3
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8092..8421)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ETH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04797.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L2_039_239G1_scaffold_216_4

Not on your lists

comp(8431..9360)
DNA (930bp) protein (310aa)
DNA methylase (Fragment) n=2 Tax=human gut metagenome RepID=K1U1A9_9ZZZZ
DNA methylase {ECO:0000313|EMBL:EKC79037.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
DNA methylase
L2_039_239G1_scaffold_216_5
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9357..9902)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EPG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04794.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L2_039_239G1_scaffold_216_6
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9899..10837)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ETH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04792.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L2_039_239G1_scaffold_216_7
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10834..11454)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B850_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29530.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_039_239G1_scaffold_216_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11588..15808)
DNA (4221bp) protein (1407aa)
Cna protein B-type domain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8F7_9FIRM
Cna protein B-type domain.
Cna protein B-type domain {ECO:0000313|EMBL:CBL15902.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_039_239G1_scaffold_216_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15888..16547)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8F6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15901.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_039_239G1_scaffold_216_10
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16729..17670)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ESG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05401.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
chromosome partitioning protein parB
L2_039_239G1_scaffold_216_11
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17624..18448)
DNA (825bp) protein (275aa)
ATPases involved in chromosome partitioning n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERZ0_9FIRM
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CDE05400.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
ATPases involved in chromosome partitioning
L2_039_239G1_scaffold_216_12
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(19179..19769)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U5U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC77434.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L2_039_239G1_scaffold_216_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20340..20774
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72505.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_039_239G1_scaffold_216_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20928..22259
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF6_9FIRM
Multidrug transporter MatE {ECO:0000313|EMBL:KJF39977.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
MatE efflux family protein
L2_039_239G1_scaffold_216_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22271..22702)
DNA (432bp) protein (144aa)
Rrf2 family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF7_9FIRM
Rrf2 family protein {ECO:0000313|EMBL:EHL72507.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator, BadM/Rrf2 family
L2_039_239G1_scaffold_216_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23341..23796)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:KJF39975.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Bacterial transcription activator, effector binding domain.
L2_039_239G1_scaffold_216_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24342..25274
DNA (933bp) protein (311aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG0_9FIRM
L2_039_239G1_scaffold_216_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25300..25488
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72511.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_039_239G1_scaffold_216_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25671..26141)
DNA (471bp) protein (157aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
MJ0936 family phosphodiesterase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG2_9FIRM
phosphoenolpyruvate-protein phosphotransferase
L2_039_239G1_scaffold_216_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26168..26995)
DNA (828bp) protein (276aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG3_9FIRM
conserved hypothetical protein TIGR00096
L2_039_239G1_scaffold_216_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26992..27714)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72514.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Predicted O-methyltransferase
L2_039_239G1_scaffold_216_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27893..28063)
DNA (171bp) protein (57aa)
Ferredoxin n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG5_9FIRM
Ferredoxin {ECO:0000313|EMBL:KJF39969.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
4Fe-4S binding domain.
L2_039_239G1_scaffold_216_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28294..29154)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72516.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Uncharacterized homolog of PSP1
L2_039_239G1_scaffold_216_24
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29309..30220)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72517.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_039_239G1_scaffold_216_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30220..30543)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72518.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_039_239G1_scaffold_216_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30659..31318)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72519.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Rhomboid family.
L2_039_239G1_scaffold_216_27
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31817..34120)
DNA (2304bp) protein (768aa)
Ribonucleotide-diphosphate reductase subunit alpha {ECO:0000313|EMBL:KJF39964.1}; EC=1.17.4.1 {ECO:0000313|EMBL:KJF39964.1};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRH0_9FIRM
L2_039_239G1_scaffold_216_28
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34368..35279)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72268.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_039_239G1_scaffold_216_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35494..36057
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72269.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative transcriptional regulator
L2_039_239G1_scaffold_216_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36170..36841
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72270.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
Displaying items 1-30 of 59 in total

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