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L2_039_239G1_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_220_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1697
DNA (1695bp) protein (565aa)
PTS system fructose-specific EIIBC component {ECO:0000313|EMBL:EEP54121.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP54121.1};; EC=2.7.1.69 {ECO:0000313|EMBL:EEP54121.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
fruA: PTS system fructose-specific EIIABC component (EC:2.7.1.- 2.7.1.69)
Heat-responsive suppressor hrsa n=2 Tax=Clostridium butyricum RepID=B1QSK7_CLOBU
L2_039_239G1_scaffold_220_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1736..1993
DNA (258bp) protein (86aa)
Phosphotransferase System HPr (HPr) Family n=4 Tax=Clostridiales RepID=D4LJF3_9FIRM
Phosphotransferase System HPr (HPr) Family
Putative phosphocarrier protein HPr {ECO:0000313|EMBL:ERI97626.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_039_239G1_scaffold_220_3
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2065..2808
DNA (744bp) protein (248aa)
Lactose phosphotransferase system repressor family protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DLE7_9FIRM
Lactose phosphotransferase system repressor family protein {ECO:0000313|EMBL:ERI97625.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Transcriptional regulators of sugar metabolism
L2_039_239G1_scaffold_220_4
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2885..3139)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2D496_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19965.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_039_239G1_scaffold_220_5
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3275..4141
DNA (867bp) protein (289aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H1U1_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDE33251.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
diguanylate cyclase (GGDEF) domain
L2_039_239G1_scaffold_220_6
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4229..4918
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7H0U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33249.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
conserved hypothetical protein TIGR00104
L2_039_239G1_scaffold_220_7
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5062..5343
DNA (282bp) protein (94aa)
Uncharacterized protein conserved in bacteria (DUF2325) n=4 Tax=Clostridiales RepID=D4LJF7_9FIRM
Uncharacterized protein conserved in bacteria (DUF2325).
Uncharacterized protein conserved in bacteria (DUF2325) {ECO:0000313|EMBL:CDE33246.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_039_239G1_scaffold_220_8
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5526..6845
DNA (1320bp) protein (440aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448, ECO:0000313|EMBL:CBL19969.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Aspartokinase n=3 Tax=Clostridiales RepID=D4LJF8_9FIRM
L2_039_239G1_scaffold_220_9
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7209..7430
DNA (222bp) protein (74aa)
Phosphotransferase system, HPr-related proteins n=3 Tax=Clostridiales RepID=D4LJF9_9FIRM
Phosphotransferase system, HPr-related proteins
Phosphotransferase system, HPr-related proteins {ECO:0000313|EMBL:CBL19970.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_039_239G1_scaffold_220_10
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7609..9975
DNA (2367bp) protein (789aa)
DEAD2 domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2ES24_9FIRM
DEAD2 domain protein {ECO:0000313|EMBL:ERI97617.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Rad3-related DNA helicases
L2_039_239G1_scaffold_220_11
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10150..11565
DNA (1416bp) protein (472aa)
Beta-lactamase class A n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H1P2_9FIRM
Beta-lactamase class A {ECO:0000313|EMBL:CDE33235.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Beta-lactamase class A
L2_039_239G1_scaffold_220_12
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11660..12031
DNA (372bp) protein (124aa)
Endoribonuclease L-PSP, putative n=3 Tax=Clostridiales RepID=D4LJG1_9FIRM
endoribonuclease L-PSP, putative
Endoribonuclease L-PSP putative {ECO:0000313|EMBL:CDE33232.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_039_239G1_scaffold_220_13
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12818..13633
DNA (816bp) protein (272aa)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) n=1 Tax=Coprococcus catus GD/7 RepID=D4JBK8_9FIRM
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBK81729.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_039_239G1_scaffold_220_14
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13623..15803
DNA (2181bp) protein (727aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJT1_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERK50815.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Signal transduction histidine kinase
L2_039_239G1_scaffold_220_15
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15834..16073
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36578.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L2_039_239G1_scaffold_220_16
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16268..17767
DNA (1500bp) protein (500aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZU84_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM86911.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
L2_039_239G1_scaffold_220_17
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18016..20871
DNA (2856bp) protein (952aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZU86_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDM86913.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L2_039_239G1_scaffold_220_18
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21050..23881
DNA (2832bp) protein (944aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D4X5_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDD84838.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L2_039_239G1_scaffold_220_19
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23881..24120
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D56DE8
Uncharacterized protein {ECO:0000313|EMBL:EEG36581.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L2_039_239G1_scaffold_220_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24420..25469
DNA (1050bp) protein (350aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHK5_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EES75454.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
diguanylate cyclase (GGDEF) domain
L2_039_239G1_scaffold_220_21
unknown

Not on your lists

comp(25905..26162)
DNA (258bp) protein (86aa)

This feature has no annotations

L2_039_239G1_scaffold_220_22
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26654..27919
DNA (1266bp) protein (422aa)
Glycerol-1-phosphate dehydrogenase n=2 Tax=Clostridiales RepID=R7GWA9_9FIRM
3-dehydroquinate synthase {ECO:0000313|EMBL:ERI97612.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Glycerol dehydrogenase and related enzymes
L2_039_239G1_scaffold_220_23
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27978..28481
DNA (504bp) protein (168aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Clostridiales RepID=D4LJG4_9FIRM
L2_039_239G1_scaffold_220_24
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28483..29892
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Clostridiales RepID=R7GZJ3_9FIRM
L2_039_239G1_scaffold_220_25
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29877..30302
DNA (426bp) protein (142aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Mini-ribonuclease 3 n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GWA6_9FIRM
hypothetical protein
L2_039_239G1_scaffold_220_26
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30274..31038
DNA (765bp) protein (255aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Blautia sp. KLE 1732 RepID=U2DME3_9FIRM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ERI97608.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_039_239G1_scaffold_220_27
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31075..31659
DNA (585bp) protein (195aa)
RNA polymerase sigma 30 subunit SigH n=2 Tax=Clostridiales RepID=R7GZI9_9FIRM
RNA polymerase sigma 30 subunit SigH {ECO:0000313|EMBL:CDE31352.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
RNA polymerase, sigma 30 subunit, SigH
L2_039_239G1_scaffold_220_28
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31744..32097
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7GW68_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19979.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_039_239G1_scaffold_220_29
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32449..34116
DNA (1668bp) protein (556aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Glutamine--tRNA ligase n=3 Tax=Clostridiales RepID=D4LJK5_9FIRM
L2_039_239G1_scaffold_220_30
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34213..34911
DNA (699bp) protein (233aa)
Maf-like protein HMPREF1547_00481 n=1 Tax=Blautia sp. KLE 1732 RepID=U2D472_9FIRM
Maf-like protein HMPREF1547_00481 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
MAF protein
Displaying items 1-30 of 63 in total

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