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L2_039_239G1_scaffold_293

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_293_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..3271
DNA (3270bp) protein (1090aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Carbamoyl-phosphate synthase large chain n=4 Tax=Bifidobacterium breve RepID=F9XXS4_BIFBU
Carbamoyl-phosphate synthase large chain
L2_039_239G1_scaffold_293_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3271..4191
DNA (921bp) protein (307aa)
Orotidine 5'-phosphate decarboxylase n=6 Tax=Bifidobacterium breve RepID=F6C588_BIFBA
Orotidine 5'-phosphate decarboxylase
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:EPD76965.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_039_239G1_scaffold_293_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4228..4818
DNA (591bp) protein (197aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Guanylate kinase n=4 Tax=Bifidobacterium breve RepID=F6C587_BIFBA
L2_039_239G1_scaffold_293_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4852..5559)
DNA (708bp) protein (236aa)
Exonuclease, DNA polymerase III, epsilon subunit family n=3 Tax=Bifidobacterium breve RepID=F6C586_BIFBA
DNA polymerase III alpha subunit
DNA polymerase III alpha subunit {ECO:0000313|EMBL:AHJ20817.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_039_239G1_scaffold_293_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5684..6013)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=U2CSX1_BIFBR
Hypothetical protein, very proline rich
Uncharacterized protein {ECO:0000313|EMBL:EFE89160.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_039_239G1_scaffold_293_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6326..8512
DNA (2187bp) protein (729aa)
Tetracycline resistance protein TetQ n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L1H1_BIFBR
Putative translation elongation and release factor
Putative translation elongation factor G {ECO:0000313|EMBL:AEF27212.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_039_239G1_scaffold_293_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8493..9161)
DNA (669bp) protein (223aa)
Phospholipase/carboxylesterase n=3 Tax=Bifidobacterium breve RepID=D4BNC5_BIFBR
Putative esterase {ECO:0000313|EMBL:BAQ99623.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Phospholipase/carboxylesterase
L2_039_239G1_scaffold_293_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9310..10542
DNA (1233bp) protein (411aa)
metC_1; cystathionine beta-lyase (EC:4.4.1.8)
Cys/Met metabolism PLP-dependent enzyme n=3 Tax=Bifidobacterium breve RepID=F6C582_BIFBA
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:EFE89163.1}; Cystathionine beta-lyase {ECO:0000313|EMBL:BAQ99624.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_039_239G1_scaffold_293_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10950..11201
DNA (252bp) protein (84aa)
Glutaredoxin n=3 Tax=Bifidobacterium breve RepID=F9XXT2_BIFBU
Glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:EFE89165.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99625.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_039_239G1_scaffold_293_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11500..12657)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C580_BIFBA
AAA+ superfamily ATPase
Uncharacterized protein {ECO:0000313|EMBL:AEF27194.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_039_239G1_scaffold_293_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13364..13531
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C579_BIFBA
Cth
Cth {ECO:0000313|EMBL:AHJ20823.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_039_239G1_scaffold_293_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13691..14602
DNA (912bp) protein (304aa)
SPFH/Band 7/PHB domain protein n=6 Tax=Bifidobacterium breve RepID=F6C578_BIFBA
Hypothetical protein, Hypothetical secreted protease
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:AEF26497.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_039_239G1_scaffold_293_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14960..15397
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRM0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76975.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein, ATPase
L2_039_239G1_scaffold_293_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15459..16304)
DNA (846bp) protein (282aa)
Phospholipase, patatin family n=2 Tax=Bifidobacterium breve RepID=H3L1F3_BIFBR
Phospholipase
Phospholipase, patatin family {ECO:0000313|EMBL:ERI87143.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_039_239G1_scaffold_293_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16431..17225)
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Glutamate racemase n=2 Tax=Bifidobacterium breve RepID=F9XXT5_BIFBU
Glutamate racemase
L2_039_239G1_scaffold_293_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17356..18255
DNA (900bp) protein (300aa)
dapF; Diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Diaminopimelate epimerase n=2 Tax=Bifidobacterium breve RepID=F9XXT6_BIFBU
L2_039_239G1_scaffold_293_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18324..19043)
DNA (720bp) protein (240aa)
Vitamin K epoxide reductase family n=3 Tax=Bifidobacterium breve RepID=F6C574_BIFBA
putative membrane spanning protein, contains a vitamin K epoxide reductase domain
Vitamin K epoxide reductase family {ECO:0000313|EMBL:AEF26895.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_039_239G1_scaffold_293_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19170..20063
DNA (894bp) protein (298aa)
PHP domain-containing protein (EC:3.1.3.-)
PHP domain protein n=2 Tax=Bifidobacterium breve RepID=F6C573_BIFBA
PHP domain protein {ECO:0000313|EMBL:ERI87139.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_039_239G1_scaffold_293_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20120..20344)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C572_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27816.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_039_239G1_scaffold_293_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20450..22081)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZH0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87137.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
phosphotransferase enzyme domain protein
L2_039_239G1_scaffold_293_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22164..23711
DNA (1548bp) protein (516aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
UvrD/REP helicase n=3 Tax=Bifidobacterium breve RepID=U2E442_BIFBR
DNA-helicase-II-like protein
L2_039_239G1_scaffold_293_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23794..25512)
DNA (1719bp) protein (573aa)
Putative hydrolase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C569_BIFBA
Putative hydrolase {ECO:0000313|EMBL:AEF26667.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Hypothetical protein
L2_039_239G1_scaffold_293_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25593..26603
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY20_BIFBU
Conserved hypothetical protein, contains Lon protease motif
Uncharacterized protein {ECO:0000313|EMBL:ABE95345.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_039_239G1_scaffold_293_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26695..27111
DNA (417bp) protein (139aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C567_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF28043.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_039_239G1_scaffold_293_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27436..29034
DNA (1599bp) protein (533aa)
DivIVA domain repeat protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C566_BIFBA
DivIVA domain repeat-containing protein
DivIVA domain repeat protein {ECO:0000313|EMBL:AEF27018.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_039_239G1_scaffold_293_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29031..30221
DNA (1191bp) protein (397aa)
ispC; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XY23_BIFBU
L2_039_239G1_scaffold_293_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30218..31441
DNA (1224bp) protein (408aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=5 Tax=Bifidobacterium breve RepID=F6C564_BIFBA
L2_039_239G1_scaffold_293_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31516..33264
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZRN8_BIFBR
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20840.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
putative membrane spanning protein
L2_039_239G1_scaffold_293_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33297..34016
DNA (720bp) protein (240aa)
DNA repair protein RecO n=5 Tax=Bifidobacterium breve RepID=F6C562_BIFBA
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_039_239G1_scaffold_293_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34013..34807
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Isoprenyl transferase n=5 Tax=Bifidobacterium breve RepID=F9XY27_BIFBU
Undecaprenyl pyrophosphate synthetase
Displaying items 1-30 of 40 in total

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