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L2_039_239G1_scaffold_389

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_389_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16..582)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NGE6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54332.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_2
unknown

Not on your lists

comp(704..997)
DNA (294bp) protein (98aa)

This feature has no annotations

L2_039_239G1_scaffold_389_3
unknown

Not on your lists

comp(1129..1470)
DNA (342bp) protein (114aa)

This feature has no annotations

L2_039_239G1_scaffold_389_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1477..1926)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NGD2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54334.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_5
unknown

Not on your lists

2041..2385
DNA (345bp) protein (115aa)

This feature has no annotations

L2_039_239G1_scaffold_389_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2334..2534)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NFW5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54335.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_7
unknown

Not on your lists

comp(2665..2919)
DNA (255bp) protein (85aa)

This feature has no annotations

L2_039_239G1_scaffold_389_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3405..3653)
DNA (249bp) protein (83aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NF52_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54336.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3762..4040)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NGF1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54337.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4279..4686
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NGD7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54339.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4965..5507
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NFX0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54340.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5491..6276
DNA (786bp) protein (262aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NF57_CLODI
Helix-turn-helix domain protein {ECO:0000313|EMBL:EQJ54341.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_039_239G1_scaffold_389_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6407..7228
DNA (822bp) protein (274aa)
ATPase associated with various cellular activities family protein n=1 Tax=Clostridium difficile P28 RepID=T4NGF4_CLODI
ATPase associated with various cellular activities family protein {ECO:0000313|EMBL:EQJ54342.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_039_239G1_scaffold_389_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7724..8917)
DNA (1194bp) protein (398aa)
Transposase Int-Tn n=1 Tax=Clostridium difficile P28 RepID=T4NG78_CLODI
Transposase Int-Tn {ECO:0000313|EMBL:EQJ54262.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Site-specific recombinase XerD
L2_039_239G1_scaffold_389_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8998..9201)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NA79_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54263.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
xis1; Excisionase Tn1549-like, CTn4-Orf33
L2_039_239G1_scaffold_389_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9217..9426)
DNA (210bp) protein (70aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NG61_CLODI
Helix-turn-helix domain protein {ECO:0000313|EMBL:EQJ54264.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_039_239G1_scaffold_389_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9413..9847)
DNA (435bp) protein (145aa)
Putative RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium ultunense Esp RepID=M1Z834_9CLOT
Putative RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CCQ94181.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L2_039_239G1_scaffold_389_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10191..11858
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NFQ5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54265.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_039_239G1_scaffold_389_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11872..12411
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NEZ1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54266.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12427..14403
DNA (1977bp) protein (659aa)
Type IV secretory system Conjugative DNA transfer family protein n=1 Tax=Clostridium difficile P28 RepID=T4NG83_CLODI
Type IV secretory system Conjugative DNA transfer family protein {ECO:0000313|EMBL:EQJ54267.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
type IV secretory pathway, VirD4 component
L2_039_239G1_scaffold_389_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14486..14731
DNA (246bp) protein (82aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NA84_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54268.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14784..15008
DNA (225bp) protein (75aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NG66_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54269.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_039_239G1_scaffold_389_23
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15027..15467
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UYX2_EEGSY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK43715.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
L2_039_239G1_scaffold_389_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15445..18153
DNA (2709bp) protein (903aa)
Type IV secretion-system coupling DNA-binding domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NFQ8_CLODI
Type IV secretion-system coupling DNA-binding domain protein {ECO:0000313|EMBL:EQJ54270.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_039_239G1_scaffold_389_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18223..20076
DNA (1854bp) protein (618aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NEZ5_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54271.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
conjugative transposon membrane protein
L2_039_239G1_scaffold_389_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20098..20925
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NG88_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54272.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20956..22032
DNA (1077bp) protein (359aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NA89_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54273.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_039_239G1_scaffold_389_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22143..23420
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NEZ9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54276.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23484..24602
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NG92_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54277.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_039_239G1_scaffold_389_30
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24617..25897
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZ08_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV37148.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Displaying items 1-30 of 100 in total

View Taxonomy