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L2_039_239G1_scaffold_396

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_396_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

56..1390
DNA (1335bp) protein (445aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Phosphomethylpyrimidine synthase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E766_9ACTN
hydroxymethylpyrimidine synthase
L2_039_239G1_scaffold_396_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1573..2403
DNA (831bp) protein (277aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EBA40576.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EBA40576.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E767_9ACTN
L2_039_239G1_scaffold_396_3
unknown

Not on your lists

comp(2580..2669)
DNA (90bp) protein (30aa)

This feature has no annotations

L2_039_239G1_scaffold_396_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2666..3808)
DNA (1143bp) protein (381aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp225 RepID=S2NUT9_LACPA
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EPC38481.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
Phage lysin, N-acetylmuramoyl-L-alanine amidase
L2_039_239G1_scaffold_396_5
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3795..4025)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B658B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04538.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L2_039_239G1_scaffold_396_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4034..4447)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E771_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40580.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4525..4782)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E772_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40581.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4779..6347)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E773_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40582.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6340..8526)
DNA (2187bp) protein (729aa)
Fibronectin type III domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E774_9ACTN
Fibronectin type III domain protein {ECO:0000313|EMBL:EBA40583.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8528..10378)
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E775_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40584.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10403..10951)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E775_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40584.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10952..11167)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E776_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40585.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11248..11673)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E777_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40586.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11676..12245)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E778_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40587.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12254..12622)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E779_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40588.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12612..12965)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E780_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40589.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12962..13378)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E781_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40590.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13387..14271)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E782_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40591.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14278..14817)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E783_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40592.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14945..15367)
DNA (423bp) protein (141aa)
Putative phage protein, HK97 gp10 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E784_9ACTN
Putative phage protein, HK97 gp10 family {ECO:0000313|EMBL:EBA40593.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15367..15588)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E785_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40594.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_22
unknown

Not on your lists

comp(15705..15896)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_039_239G1_scaffold_396_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15896..17890)
DNA (1995bp) protein (665aa)
Phage protein F-like protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E787_9ACTN
Phage protein F-like protein {ECO:0000313|EMBL:EBA40596.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18081..18422)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E789_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40598.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18433..19464)
DNA (1032bp) protein (344aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E790_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EBA40599.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19812..21437)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E791_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40600.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21438..22340)
DNA (903bp) protein (301aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E792_9ACTN
Conserved domain protein {ECO:0000313|EMBL:EBA40601.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22340..23779)
DNA (1440bp) protein (480aa)
Putative phage portal protein, SPP1 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E793_9ACTN
Putative phage portal protein, SPP1 family {ECO:0000313|EMBL:EBA40602.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_039_239G1_scaffold_396_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23784..24980)
DNA (1197bp) protein (399aa)
Phage terminase, large subunit, PBSX family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E794_9ACTN
Phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EBA40603.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_396_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24984..25409)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E795_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40604.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Displaying items 1-30 of 65 in total

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