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L2_039_239G1_scaffold_401

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_401_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(634..1122)
DNA (489bp) protein (163aa)
Uncharacterized protein n=15 Tax=root RepID=A8RVI0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97193.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_039_239G1_scaffold_401_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1706..1846)
DNA (141bp) protein (47aa)
Uncharacterized protein n=13 Tax=Clostridiales RepID=A8SX46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31575.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_239G1_scaffold_401_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2264..2434)
DNA (171bp) protein (57aa)
Uncharacterized protein n=29 Tax=Firmicutes RepID=A8RSN7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO31576.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_239G1_scaffold_401_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2421..3185)
DNA (765bp) protein (255aa)
TraG/TraD family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGI1_CLOSV
Type IV secretory pathway, VirD4 components
Uncharacterized protein {ECO:0000313|EMBL:ETD20428.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_039_239G1_scaffold_401_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3218..4144)
DNA (927bp) protein (309aa)
Resolvase, N-terminal domain protein n=2 Tax=root RepID=B0PDD2_9FIRM
Type IV secretory pathway, VirD4 components
Uncharacterized protein {ECO:0000313|EMBL:EGN49694.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_039_239G1_scaffold_401_6
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4141..4617)
DNA (477bp) protein (159aa)
Uncharacterized protein n=19 Tax=Firmicutes RepID=A8SX52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE13547.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
putative conjugative transposon proteinTn1549-like, CTn4-Orf3
L2_039_239G1_scaffold_401_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4659..4880)
DNA (222bp) protein (74aa)
Uncharacterized protein n=38 Tax=Bacteria RepID=H1LZ82_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD20426.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_039_239G1_scaffold_401_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4904..5887)
DNA (984bp) protein (328aa)
Uncharacterized protein n=15 Tax=Firmicutes RepID=A8SX55_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ14013.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_039_239G1_scaffold_401_9
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6208..7542
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GDC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10807.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_039_239G1_scaffold_401_10
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7792..8010
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NPT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS82057.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
putative Xre family DNA-binding protein
L2_039_239G1_scaffold_401_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8059..9504)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36105.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
polysaccharide biosynthesis protein
L2_039_239G1_scaffold_401_12
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9668..10159
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XZM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL02153.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L2_039_239G1_scaffold_401_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10270..12522
DNA (2253bp) protein (751aa)
Polysaccharide pyruvyl transferase CsaB n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VU79_9CLOT
Polysaccharide pyruvyl transferase CsaB {ECO:0000313|EMBL:EOQ36103.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative polysaccharide pyruvyl transferase
L2_039_239G1_scaffold_401_14
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12519..13697
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IX54_9FIRM
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
L2_039_239G1_scaffold_401_15
unknown

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13836..13946
DNA (111bp) protein (37aa)

This feature has no annotations

L2_039_239G1_scaffold_401_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14007..14498
DNA (492bp) protein (164aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYV6_9CLOT
L2_039_239G1_scaffold_401_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14579..15289
DNA (711bp) protein (237aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VV18_9CLOT
L2_039_239G1_scaffold_401_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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15351..16772
DNA (1422bp) protein (474aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0X7_9FIRM
L2_039_239G1_scaffold_401_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16809..17846
DNA (1038bp) protein (346aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
purM; Phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VUF5_9CLOT
L2_039_239G1_scaffold_401_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17911..18534
DNA (624bp) protein (208aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VU74_9CLOT
L2_039_239G1_scaffold_401_21
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18555..19268
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VYV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36097.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
hypothetical protein
L2_039_239G1_scaffold_401_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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19279..20454
DNA (1176bp) protein (392aa)
AICARFT/IMPCHase bienzyme n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YND9_9FIRM
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:EHM53508.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
inosine monophosphate cyclohydrolase
L2_039_239G1_scaffold_401_23
unknown

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20451..21035
DNA (585bp) protein (195aa)

This feature has no annotations

L2_039_239G1_scaffold_401_24
unknown

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21032..21586
DNA (555bp) protein (185aa)

This feature has no annotations

L2_039_239G1_scaffold_401_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21583..22833
DNA (1251bp) protein (417aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VUE9_9CLOT
phosphoribosylamine--glycine ligase
L2_039_239G1_scaffold_401_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22892..23416
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VU70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ36093.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_401_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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23904..24461
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IDW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60303.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
RNA polymerase, sigma subunit, ECF family
L2_039_239G1_scaffold_401_28
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24454..25236
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IDW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35474.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_401_29
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25339..28668
DNA (3330bp) protein (1110aa)
Peptidase M16C associated domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TM53_ALKMQ
peptidase M16C associated domain-containing protein
Peptidase M16C associated domain protein {ECO:0000313|EMBL:ABR47271.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L2_039_239G1_scaffold_401_30
unknown

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comp(28724..28951)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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