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L2_039_239G1_scaffold_407

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_407_1
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26..1144)
DNA (1119bp) protein (373aa)
amidase (EC:3.5.2.10)
Creatinine amidohydrolase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CNR8_THEYO
Tax=BJP_IG2103_Clostridiales_50_15
L2_039_239G1_scaffold_407_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1304..2293)
DNA (990bp) protein (330aa)
Sugar-binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXU0_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:EEG56089.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Periplasmic binding protein domain containing protein
L2_039_239G1_scaffold_407_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2368..3339)
DNA (972bp) protein (324aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXT9_9CLOT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEG56088.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
rbsC; D-ribose transport system permease
L2_039_239G1_scaffold_407_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3329..4336)
DNA (1008bp) protein (336aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXT8_9CLOT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEG56087.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
putative ABC-type sugar transport system, permease component
L2_039_239G1_scaffold_407_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4329..5852)
DNA (1524bp) protein (508aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC transporter, ATP-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXT7_9CLOT
D-ribose transporter ATP-binding protein
L2_039_239G1_scaffold_407_6
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5871..6773)
DNA (903bp) protein (301aa)
BtdhL n=1 Tax=Azoarcus anaerobius RepID=A0N0V2_9RHOO
6-phosphogluconate dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
L2_039_239G1_scaffold_407_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6770..7804)
DNA (1035bp) protein (345aa)
GroES-like protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXT4_9CLOT
GroES-like protein {ECO:0000313|EMBL:EEG56122.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
oxidoreductase
L2_039_239G1_scaffold_407_8
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7801..8883)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RM32_9CLOT
alcohol dehydrogenase
Tax=BJP_IG2103_Clostridiales_50_15
L2_039_239G1_scaffold_407_9
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8896..9954)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RM32_9CLOT
alcohol dehydrogenase
Tax=BJP_IG2103_Clostridiales_50_15
L2_039_239G1_scaffold_407_10
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10356..11414
DNA (1059bp) protein (353aa)
Creatininase n=5 Tax=Pelosinus fermentans RepID=I8RMM4_9FIRM
Creatininase {ECO:0000313|EMBL:EIW18842.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
Creatininase
L2_039_239G1_scaffold_407_11
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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11435..12259
DNA (825bp) protein (275aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC00_SPISS
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADK79880.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L2_039_239G1_scaffold_407_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12356..13033
DNA (678bp) protein (226aa)
Transcriptional regulator, GntR family n=4 Tax=Clostridium difficile RepID=U3UHJ9_CLODI
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCK96056.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
GntR family transcriptional regulator
L2_039_239G1_scaffold_407_13
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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13140..14615
DNA (1476bp) protein (492aa)
Putative uncharacterized protein id=4754881 bin=GWA2_Tenericute_38_26 species=Synergistes sp. 3_1_syn1 genus=Synergistes taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
hypothetical protein
Tax=GWE2_Tenericutes_38_8_curated
L2_039_239G1_scaffold_407_14
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14671..15699)
DNA (1029bp) protein (343aa)
namA; NADPH dehydrogenase (EC:1.6.99.1)
NADPH dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01614}; EC=1.6.99.1 {ECO:0000255|HAMAP-Rule:MF_01614};; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
NADPH dehydrogenase NamA n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELB1_CLOPA
L2_039_239G1_scaffold_407_15
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16010..17371
DNA (1362bp) protein (454aa)
Condensation domain protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STF9_9FIRM
Condensation domain protein {ECO:0000313|EMBL:EDP26492.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Condensation domain.
L2_039_239G1_scaffold_407_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17437..19098)
DNA (1662bp) protein (554aa)
Sulfate permease n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZW0_9CLOT
Sulfate permease {ECO:0000313|EMBL:EOQ37836.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
sulfate transporter
L2_039_239G1_scaffold_407_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19219..20319)
DNA (1101bp) protein (367aa)
Putative glycerol dehydrogenase n=2 Tax=Clostridiales RepID=U2BB56_9CLOT
Putative glycerol dehydrogenase {ECO:0000313|EMBL:ERI69063.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
iron-containing alcohol dehydrogenase
L2_039_239G1_scaffold_407_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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21024..21407
DNA (384bp) protein (128aa)
Response regulator receiver protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HVN4_9FIRM
Response regulator receiver protein {ECO:0000313|EMBL:CCY28541.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L2_039_239G1_scaffold_407_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22035..22736)
DNA (702bp) protein (234aa)
Two-component system, OmpR family, KDP operon response regulator KdpE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH21_9FIRM
Two-component system, OmpR family, KDP operon response regulator KdpE {ECO:0000313|EMBL:EGJ45660.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
kdpE; OmpR family two component system KDP operon response regulator
L2_039_239G1_scaffold_407_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22729..25350)
DNA (2622bp) protein (874aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1Z7_9FIRM
L2_039_239G1_scaffold_407_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25389..25868)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QP37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68542.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_039_239G1_scaffold_407_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25902..26552)
DNA (651bp) protein (217aa)
TrkA N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1Z9_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:EDM97669.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
K+ transport systems, NAD-binding component
L2_039_239G1_scaffold_407_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26583..27923)
DNA (1341bp) protein (447aa)
Trk system potassium uptake protein TrkH n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH25_9FIRM
Trk system potassium uptake protein TrkH {ECO:0000313|EMBL:EGJ45664.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Trk-type K+ transport systems, membrane components
L2_039_239G1_scaffold_407_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28061..28255)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R025_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68545.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_039_239G1_scaffold_407_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28419..29087)
DNA (669bp) protein (223aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Potassium-transporting ATPase C chain n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQC8_9FIRM
potassium-transporting ATPase C chain
L2_039_239G1_scaffold_407_26
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(29106..31157)
DNA (2052bp) protein (684aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HA77_9FIRM
L2_039_239G1_scaffold_407_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31174..32943)
DNA (1770bp) protein (590aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6K2_9FIRM
L2_039_239G1_scaffold_407_28
unknown

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comp(33075..33170)
DNA (96bp) protein (32aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQC5_9FIRM
L2_039_239G1_scaffold_407_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33322..36006)
DNA (2685bp) protein (895aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Putative histidine kinase KdpD n=2 Tax=Oscillibacter RepID=U2R738_9FIRM
kdpD; hypothetical protein
L2_039_239G1_scaffold_407_30
unknown

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comp(36979..37164)
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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