ggKbase home page

L2_039_239G1_scaffold_413

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_413_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..183)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27390.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_239G1_scaffold_413_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(249..743)
DNA (495bp) protein (165aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YXR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27389.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_239G1_scaffold_413_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(780..1265)
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YXR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27388.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_239G1_scaffold_413_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1349..2632)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CNK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI68911.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L2_039_239G1_scaffold_413_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2629..3348)
DNA (720bp) protein (240aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CI30_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ERI68912.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
LytTr DNA-binding domain-containing protein
L2_039_239G1_scaffold_413_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3583..5883
DNA (2301bp) protein (767aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXR3_9FIRM
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein {ECO:0000313|EMBL:EHM37195.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_039_239G1_scaffold_413_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5885..6766
DNA (882bp) protein (294aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs (EC:1.17.1.4)
FAD binding domain in molybdopterin dehydrogenase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXR2_9FIRM
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:EHM37194.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_039_239G1_scaffold_413_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6763..7254
DNA (492bp) protein (164aa)
Putative carbon monoxide dehydrogenase, small subunit n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXR1_9FIRM
Putative carbon monoxide dehydrogenase, small subunit {ECO:0000313|EMBL:EHM37193.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
xanthine dehydrogenase
L2_039_239G1_scaffold_413_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7586..7792
DNA (207bp) protein (69aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YXQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27382.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_239G1_scaffold_413_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7864..8523)
DNA (660bp) protein (220aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.8)
Butyrate--acetoacetate CoA-transferase subunit B n=3 Tax=Clostridiales RepID=G9YXQ8_9FIRM
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:EHO27381.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_239G1_scaffold_413_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8523..9215)
DNA (693bp) protein (231aa)
putative CoA-transferase alpha subunit (EC:2.8.3.-)
Putative 3-oxoadipate CoA-transferase subunit A n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ASV0_9CLOT
Putative 3-oxoadipate CoA-transferase subunit A {ECO:0000313|EMBL:ERI68919.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_039_239G1_scaffold_413_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9304..10563)
DNA (1260bp) protein (420aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B9P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57560.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_039_239G1_scaffold_413_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10738..12675)
DNA (1938bp) protein (646aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27378.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_239G1_scaffold_413_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12629..13531)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57558.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative ABC transporter ATP-binding protein
L2_039_239G1_scaffold_413_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13524..13913)
DNA (390bp) protein (130aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridiales RepID=G9YXQ3_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERI68885.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
transcriptional regulator, GntR family
L2_039_239G1_scaffold_413_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14136..14597
DNA (462bp) protein (154aa)
HD domain protein n=3 Tax=Clostridiales RepID=G9YXQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27375.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_239G1_scaffold_413_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14812..16005
DNA (1194bp) protein (398aa)
putative glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase n=2 Tax=Clostridiales RepID=H1CJB1_9FIRM
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:EHO27374.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_039_239G1_scaffold_413_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16065..17024
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
prs; phosphoribosyl pyrophosphate synthetase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=2 Tax=Clostridiales RepID=G9YXP9_9FIRM
L2_039_239G1_scaffold_413_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17099..17695
DNA (597bp) protein (199aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJA9_9FIRM
L2_039_239G1_scaffold_413_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17706..18161
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27371.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
spermine/spermidine acetyltransferase
L2_039_239G1_scaffold_413_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18244..21753
DNA (3510bp) protein (1170aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
mfd; transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJA7_9FIRM
L2_039_239G1_scaffold_413_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21845..23086
DNA (1242bp) protein (414aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
PPIC-type PPIASE domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BAM6_9CLOT
PpiC-type peptidyl-prolyl cis-trans isomerase
L2_039_239G1_scaffold_413_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23226..23585
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YXP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27437.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
DNA-binding protein
L2_039_239G1_scaffold_413_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23588..24277
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=2 Tax=Clostridiales RepID=G9YXP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27436.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
response regulator receiver protein
L2_039_239G1_scaffold_413_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24363..27008
DNA (2646bp) protein (882aa)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXP1_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EHM37173.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
MgtA4; cation transport ATPase
L2_039_239G1_scaffold_413_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27090..27818)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YXP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27433.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_239G1_scaffold_413_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27904..29289)
DNA (1386bp) protein (462aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Pyridoxal-phosphate dependent TrpB-like enzyme n=2 Tax=Clostridiales RepID=H1CJ99_9FIRM
hypothetical protein
L2_039_239G1_scaffold_413_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29903..31654)
DNA (1752bp) protein (584aa)
Putative ferredoxin hydrogenase HydA1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BA95_9CLOT
Putative ferredoxin hydrogenase HydA1 {ECO:0000313|EMBL:ERI68733.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative iron hydrogenase
L2_039_239G1_scaffold_413_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31651..32916)
DNA (1266bp) protein (422aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
HymB family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ASD8_9CLOT
HymB family protein {ECO:0000313|EMBL:ERI68734.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_039_239G1_scaffold_413_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32929..33429)
DNA (501bp) protein (167aa)
Respiratory-chain NADH dehydrogenase subunit n=3 Tax=Clostridiales RepID=G9YQA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27428.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
Displaying items 1-30 of 33 in total

View Taxonomy