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L2_039_239G1_scaffold_461

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_461_1
unknown

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comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

L2_039_239G1_scaffold_461_2
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(174..1355)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39946.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
4-hydroxybutyrate dehydrogenase
L2_039_239G1_scaffold_461_3
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1636..2424)
DNA (789bp) protein (263aa)
Amino acid ABC transporter ATP-binding protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QGC8_9FIRM
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC35683.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
putative amino acid ABC transporter, ATP-binding protein
L2_039_239G1_scaffold_461_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2438..3169)
DNA (732bp) protein (244aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAQ9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEU95043.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
L2_039_239G1_scaffold_461_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3248..4099)
DNA (852bp) protein (284aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQH0_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EFB75060.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_039_239G1_scaffold_461_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4341..5684
DNA (1344bp) protein (448aa)
Butyryl-CoA transferase n=2 Tax=Bacteria RepID=R5GPS2_9FIRM
Butyryl-CoA transferase {ECO:0000313|EMBL:CCY14536.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
4-hydroxybutyrate CoA-transferase
L2_039_239G1_scaffold_461_7
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5836..6390
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P0K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12016.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L2_039_239G1_scaffold_461_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6495..7793)
DNA (1299bp) protein (433aa)
Peptidase, M23 family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPQ9_9CLOT
Peptidase, M23 family {ECO:0000313|EMBL:EDO62721.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
peptidase M23
L2_039_239G1_scaffold_461_9

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comp(7936..8832)
DNA (897bp) protein (299aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1T9L0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC66298.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_039_239G1_scaffold_461_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8992..10095
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W266_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
GTP-binding protein YchF
L2_039_239G1_scaffold_461_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10337..12082
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37246.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative hydrolase
L2_039_239G1_scaffold_461_12
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12139..13083
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37245.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L2_039_239G1_scaffold_461_13
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13646..14179
DNA (534bp) protein (178aa)
GNAT family Acetyltransferase n=1 Tax=Clostridium sp. CAG:448 RepID=R6T4P1_9CLOT
GNAT family Acetyltransferase {ECO:0000313|EMBL:CDC62766.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
conserved hypothetical protein
L2_039_239G1_scaffold_461_14
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14219..16153
DNA (1935bp) protein (645aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXH8_9CLOT
L2_039_239G1_scaffold_461_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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16441..16650
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98934.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_039_239G1_scaffold_461_16
unknown

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16647..16754
DNA (108bp) protein (36aa)

This feature has no annotations

L2_039_239G1_scaffold_461_17
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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16908..17672
DNA (765bp) protein (255aa)
Cof-like hydrolase n=1 Tax=Dialister sp. CAG:486 RepID=R6AF92_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CDA47429.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
HAD-superfamily hydrolase
L2_039_239G1_scaffold_461_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17689..18459
DNA (771bp) protein (257aa)
TatD family hydrolase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W1Y9_9CLOT
TatD family hydrolase {ECO:0000313|EMBL:EOQ37172.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
TatD family hydrolase
L2_039_239G1_scaffold_461_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18786..19457
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKP0_9FIRM
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP {ECO:0000313|EMBL:ERI68726.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_039_239G1_scaffold_461_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19435..20934
DNA (1500bp) protein (500aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B956_9CLOT
histidine kinase
L2_039_239G1_scaffold_461_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21035..21889
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO24346.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter ATP-binding protein
L2_039_239G1_scaffold_461_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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21886..24069
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VQ10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY92760.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L2_039_239G1_scaffold_461_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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24062..24772
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YSR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56568.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_239G1_scaffold_461_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24882..25907)
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
2-dehydro-3-deoxygluconokinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH45_9FIRM
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:EGJ45684.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_039_239G1_scaffold_461_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25937..26284)
DNA (348bp) protein (116aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97571.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_039_239G1_scaffold_461_26
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26277..26921)
DNA (645bp) protein (215aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSN2_9CLOT
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EOQ35266.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
2-dehydro-3-deoxyphosphooctonate aldolase
L2_039_239G1_scaffold_461_27
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27117..27899
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VWG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35267.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transcriptional regulator, IclR family
L2_039_239G1_scaffold_461_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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27922..28695
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PME9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75734.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Esterase/lipase
L2_039_239G1_scaffold_461_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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28699..29190
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IDX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI60315.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
acetyltransferase
L2_039_239G1_scaffold_461_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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29301..29603
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70203.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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