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L2_039_239G1_scaffold_479

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_479_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..629)
DNA (627bp) protein (209aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 1.1.1.157)
Putative 3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B0T1_9CLOT
Putative 3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ERI65358.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_039_239G1_scaffold_479_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(786..1580)
DNA (795bp) protein (265aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Clostridiales RepID=G9YNN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25439.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
FabG; dehydrogenase
L2_039_239G1_scaffold_479_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1600..1953)
DNA (354bp) protein (118aa)
Cupin domain protein n=2 Tax=Clostridiales RepID=G9YNN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25438.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_239G1_scaffold_479_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2355..2816
DNA (462bp) protein (154aa)
HTH-type transcriptional activator HxlR family protein n=3 Tax=Clostridiales RepID=G9YNN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25437.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative transcriptional regulator
L2_039_239G1_scaffold_479_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2987..4324
DNA (1338bp) protein (446aa)
MATE efflux family protein n=3 Tax=Clostridiales RepID=G9YNN0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERI65353.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative efflux protein, MATE family
L2_039_239G1_scaffold_479_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4504..5349
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25435.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transketolase
L2_039_239G1_scaffold_479_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5352..6299
DNA (948bp) protein (316aa)
Transketolase, pyridine binding domain protein n=2 Tax=Clostridiales RepID=G9YNM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25434.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transketolase
L2_039_239G1_scaffold_479_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6296..7123
DNA (828bp) protein (276aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AZ56_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:ERI65350.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
HAD-superfamily hydrolase, subfamily IIB
L2_039_239G1_scaffold_479_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7180..8538)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AHM6_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ERI65349.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative drug/sodium antiporter, MATE family
L2_039_239G1_scaffold_479_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8608..9408
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25431.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
regulatory protein MerR
L2_039_239G1_scaffold_479_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9458..9961)
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=2 Tax=Clostridiales RepID=G9YQT0_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Transcription elongation factor
L2_039_239G1_scaffold_479_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10061..10657)
DNA (597bp) protein (199aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQT1_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_239G1_scaffold_479_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10667..11425)
DNA (759bp) protein (253aa)
UPF0246 protein HMPREF0372_01875 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQT2_9FIRM
UPF0246 protein HMPREF0372_01875 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_039_239G1_scaffold_479_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11422..11829)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BB29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69405.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_039_239G1_scaffold_479_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11885..12265)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25426.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_239G1_scaffold_479_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12262..12942)
DNA (681bp) protein (227aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YQT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25425.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_239G1_scaffold_479_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13076..13930
DNA (855bp) protein (285aa)
phosphoesterase (EC:3.1.-.-)
Ser/Thr phosphatase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQT6_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EHM50800.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_039_239G1_scaffold_479_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14100..15200
DNA (1101bp) protein (367aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQT7_9FIRM
carbamoyl phosphate synthase small subunit
L2_039_239G1_scaffold_479_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15193..18411
DNA (3219bp) protein (1073aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQT8_9FIRM
carbamoyl-phosphate synthase large subunit
L2_039_239G1_scaffold_479_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18427..19089
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI68159.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_039_239G1_scaffold_479_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19159..19713
DNA (555bp) protein (185aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25420.1}; Flags: Fragment;; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_039_239G1_scaffold_479_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19710..20117
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50774.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_039_239G1_scaffold_479_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20419..21963
DNA (1545bp) protein (515aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CG41_9CLOT
L2_039_239G1_scaffold_479_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22257..22745)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76738.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Helix-turn-helix.
L2_039_239G1_scaffold_479_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23049..23252
DNA (204bp) protein (68aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=G9YQU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENZ47368.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L2_039_239G1_scaffold_479_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23255..24337
DNA (1083bp) protein (361aa)
Site-specific recombinase, phage integrase family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQU6_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EHM50778.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Site-specific recombinase XerD
L2_039_239G1_scaffold_479_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24342..24677
DNA (336bp) protein (112aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=G9YQU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50779.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_039_239G1_scaffold_479_28
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24667..25842
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LLD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59378.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L2_039_239G1_scaffold_479_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26276..26521
DNA (246bp) protein (82aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=R0B4A2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52820.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_039_239G1_scaffold_479_30
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26579..26884)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67481.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Helix-turn-helix.
Displaying items 1-30 of 96 in total

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