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L2_039_239G1_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_512_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..454
DNA (453bp) protein (151aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Oligoribonuclease n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVW2_BIFLJ
oligoribonuclease
L2_039_239G1_scaffold_512_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

503..1921
DNA (1419bp) protein (473aa)
AAA ATPase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVW1_BIFLJ
ATP-dependent endonuclease
AAA ATPase {ECO:0000313|EMBL:ADH01017.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_039_239G1_scaffold_512_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2224..4011
DNA (1788bp) protein (596aa)
Dioxygenase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVW0_BIFLJ
dioxygenase
Dioxygenase {ECO:0000313|EMBL:ADH01016.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_039_239G1_scaffold_512_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3998..5191
DNA (1194bp) protein (398aa)
Pyruvate formate-lyase activating enzyme n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVV9_BIFLJ
pyruvate formate-lyase activating enzyme
Pyruvate formate-lyase activating enzyme {ECO:0000313|EMBL:ADH01015.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_039_239G1_scaffold_512_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5216..5479)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPG8_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KFI73748.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_239G1_scaffold_512_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5572..5904)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBK6_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:KFI73749.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_239G1_scaffold_512_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5995..7713
DNA (1719bp) protein (573aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Proline--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPG9_BIFLS
prolyl-tRNA synthetase
L2_039_239G1_scaffold_512_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7989..8732
DNA (744bp) protein (248aa)
Single-strand binding protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPH0_BIFLS
hypothetical protein
Single-strand binding protein {ECO:0000313|EMBL:ACJ51700.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_039_239G1_scaffold_512_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8815..10989)
DNA (2175bp) protein (725aa)
Neprilysin {ECO:0000313|EMBL:KFI73752.1}; EC=3.4.24.11 {ECO:0000313|EMBL:KFI73752.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
neprilysin (EC:3.4.24.11)
Neprilysin n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPH1_BIFLS
L2_039_239G1_scaffold_512_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11166..12089
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DR71_BIFLD
hdeD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99354.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_039_239G1_scaffold_512_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12291..13073
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Methionine aminopeptidase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPH3_BIFLS
methionine aminopeptidase
L2_039_239G1_scaffold_512_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13347..14639
DNA (1293bp) protein (431aa)
citrate synthase I (EC:2.3.3.1)
Citrate synthase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPH4_BIFLS
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_039_239G1_scaffold_512_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14852..15871)
DNA (1020bp) protein (340aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATD4_BIFLN
hypothetical protein
L2_039_239G1_scaffold_512_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16100..17185)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=V6XXZ5_BIFLN
Helix-turn-helix motif {ECO:0000313|EMBL:KFI73757.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_239G1_scaffold_512_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17263..21258
DNA (3996bp) protein (1332aa)
SNF2-like protein {ECO:0000313|EMBL:KFI73758.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KFI73758.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Putative helicase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPH7_BIFLS
SNF2-related protein
L2_039_239G1_scaffold_512_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21328..21525
DNA (198bp) protein (66aa)
SWIM zinc finger family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I2U2_BIFLN
helicase
Helicase {ECO:0000313|EMBL:KEY33497.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_039_239G1_scaffold_512_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21592..22065)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=B7GPH8_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI73759.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_039_239G1_scaffold_512_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22705..22998)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPH9_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ51709.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_039_239G1_scaffold_512_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23084..23599
DNA (516bp) protein (172aa)
DNA mismatch endonuclease vsr n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVU4_BIFLJ
DNA mismatch endonuclease vsr
DNA mismatch endonuclease vsr {ECO:0000313|EMBL:KFI73761.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_039_239G1_scaffold_512_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23630..24685)
DNA (1056bp) protein (352aa)
Oxidoreductase domain protein n=3 Tax=Bifidobacterium longum RepID=D6ZVU3_BIFLJ
oxidoreductase domain-containing protein
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EIJ28372.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_039_239G1_scaffold_512_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24779..26002
DNA (1224bp) protein (408aa)
Class I and II aminotransferase {ECO:0000313|EMBL:KFI73763.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KFI73763.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Aminotransferase, class I and II n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZVU2_BIFLJ
aminotransferase
L2_039_239G1_scaffold_512_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26180..27148
DNA (969bp) protein (323aa)
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:CCK35474.1}; EC=3.6.1.11 {ECO:0000313|EMBL:CCK35474.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Ppx/GppA phosphatase n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZVU1_BIFLJ
Ppx/GppA phosphatase
L2_039_239G1_scaffold_512_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27260..28372)
DNA (1113bp) protein (371aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVU0_BIFLJ
endonuclease
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADH00996.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_039_239G1_scaffold_512_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28855..29073
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AVK5_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ25111.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L2_039_239G1_scaffold_512_25
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29195..29623
DNA (429bp) protein (143aa)
Nucleoside 2-deoxyribosyltransferase n=14 Tax=Bifidobacterium RepID=D6DBP2_BIFLN
nucleoside 2-deoxyribosyltransferase
Putative nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:CCY94869.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_039_239G1_scaffold_512_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29791..30297
DNA (507bp) protein (169aa)
Large-conductance mechanosensitive channel n=10 Tax=Bifidobacterium longum RepID=F8ATE6_BIFLN
large-conductance mechanosensitive channel
Large conductance mechanosensitive channel protein {ECO:0000313|EMBL:EIJ28381.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_039_239G1_scaffold_512_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30417..32282
DNA (1866bp) protein (622aa)
Long-chain-fatty-acid--CoA ligase n=8 Tax=Bifidobacterium longum RepID=F8ATE7_BIFLN
AMP-binding enzyme {ECO:0000313|EMBL:EIJ28361.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
long-chain-fatty-acid--CoA ligase
L2_039_239G1_scaffold_512_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32418..32942)
DNA (525bp) protein (175aa)
NAD(P)H dehydrogenase (Quinone) n=3 Tax=Bifidobacterium longum subsp. longum RepID=D6ZVT5_BIFLJ
mdaB; mdab
Mdab {ECO:0000313|EMBL:AEI96964.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_039_239G1_scaffold_512_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33065..33367)
DNA (303bp) protein (101aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Exodeoxyribonuclease 7 small subunit n=3 Tax=Bifidobacterium longum subsp. longum RepID=D6ZVT3_BIFLJ
xseB; xseb
L2_039_239G1_scaffold_512_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33421..34785)
DNA (1365bp) protein (455aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R3Y2_BIFLM
xseA; xsea
Displaying items 1-30 of 33 in total

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