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L2_039_239G1_scaffold_520

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_520_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..331)
DNA (330bp) protein (110aa)
GntR-family transcriptional regulator n=7 Tax=Clostridium difficile RepID=C9XNH1_CLODC
GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQG78072.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_039_239G1_scaffold_520_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(571..1965)
DNA (1395bp) protein (465aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
M18 family aminopeptidase n=87 Tax=Clostridium difficile RepID=T2T6K7_CLODI
aminopeptidase 1
L2_039_239G1_scaffold_520_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1985..2194)
DNA (210bp) protein (70aa)
UPF0291 protein CD630_10710 n=217 Tax=Clostridium difficile RepID=Y1071_CLOD6
hypothetical protein
UPF0291 protein BN165_740008 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L2_039_239G1_scaffold_520_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2223..3677)
DNA (1455bp) protein (485aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridium difficile RepID=G6BVR9_CLODI
putative aminotransferase
Putative aminotransferase {ECO:0000313|EMBL:CAJ67914.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_039_239G1_scaffold_520_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3778..4572
DNA (795bp) protein (265aa)
putative histidinol phosphatase/hydrolase, PHPfamily (EC:3.1.3.15)
Putative histidinol phosphatase/hydrolase, PHP family {ECO:0000313|EMBL:CCL21193.1}; EC=3.1.3.15 {ECO:0000313|EMBL:CCL21193.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Histidinol phosphate phosphatase, HisJ family protein n=7 Tax=Clostridium difficile RepID=T3NHE7_CLODI
L2_039_239G1_scaffold_520_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4623..5945
DNA (1323bp) protein (441aa)
MatE family protein n=185 Tax=Clostridium difficile RepID=T3I270_CLODC
polysaccharide biosynthesis/sporulation protein
Putative polysaccharide biosynthesis/sporulation protein {ECO:0000313|EMBL:CCL21192.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_039_239G1_scaffold_520_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6046..7263)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T3EQB3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ26243.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
cdeC; exosporium cysteine rich protein
L2_039_239G1_scaffold_520_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7741..8652)
DNA (912bp) protein (304aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=T3ELC2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE67724.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L2_039_239G1_scaffold_520_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8864..9262
DNA (399bp) protein (133aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T3EMA8_CLODI
uncharacterised protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ30234.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_039_239G1_scaffold_520_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9385..10401)
DNA (1017bp) protein (339aa)
LacI-family transcriptional regulator (Catabolite control protein) n=213 Tax=Clostridium difficile RepID=C9XNG2_CLODC
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CCL29142.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_039_239G1_scaffold_520_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10654..10854)
DNA (201bp) protein (67aa)
Uncharacterized protein n=178 Tax=Clostridium difficile RepID=C9YK21_CLODR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQG77504.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_039_239G1_scaffold_520_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10888..11067)
DNA (180bp) protein (60aa)
Uncharacterized protein n=197 Tax=Clostridium difficile RepID=C9YK20_CLODR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQG77593.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_039_239G1_scaffold_520_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11249..11476)
DNA (228bp) protein (76aa)
Uncharacterized protein n=44 Tax=Clostridium difficile RepID=C9XNF9_CLODC
Uncharacterized protein {ECO:0000313|EMBL:EFH06929.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
hypothetical protein
L2_039_239G1_scaffold_520_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11503..11928)
DNA (426bp) protein (142aa)
Uncharacterized protein n=214 Tax=Clostridium difficile RepID=Q18AR3_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL29140.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_039_239G1_scaffold_520_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12100..12327
DNA (228bp) protein (76aa)
Acyl carrier protein n=222 Tax=Clostridium difficile RepID=C9XNF7_CLODC
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_039_239G1_scaffold_520_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12471..13475)
DNA (1005bp) protein (335aa)
37-kD nucleoid-associated bacterial family protein n=9 Tax=Clostridium difficile PF2_CLODI">RepID=T3EPF2_CLODI
hypothetical protein
Nucleoid-associated protein {ECO:0000313|EMBL:CKG92544.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS86153.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L2_039_239G1_scaffold_520_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13489..14391)
DNA (903bp) protein (301aa)
pseudouridylate synthase (EC:4.2.1.70)
Putative pseudouridylate synthase {ECO:0000313|EMBL:CAJ67901.1}; EC=4.2.1.70 {ECO:0000313|EMBL:CAJ67901.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Pseudouridine synthase n=40 Tax=Clostridium difficile RepID=T3I2N4_CLODC
L2_039_239G1_scaffold_520_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14587..15777)
DNA (1191bp) protein (397aa)
Acetyl-CoA C-acetyltransferase n=8 Tax=Clostridium difficile RepID=G6B8C9_CLODI
thlA1; acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CBE03061.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_039_239G1_scaffold_520_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15849..16694)
DNA (846bp) protein (282aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:CCL29135.1}; EC=1.1.1.157 {ECO:0000313|EMBL:CCL29135.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
3-hydroxybutyryl-CoA dehydrogenase n=208 Tax=Clostridium difficile RepID=C9XNF3_CLODC
3-hydroxybutyryl-CoA dehydrogenase
L2_039_239G1_scaffold_520_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16792..17589)
DNA (798bp) protein (266aa)
3-hydroxybutyryl-CoA dehydratase (Crotonase) {ECO:0000313|EMBL:CCL21180.1}; EC=4.2.1.55 {ECO:0000313|EMBL:CCL21180.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
3-hydroxybutyryl-CoA dehydratase n=165 Tax=Clostridium difficile RepID=C9XNF2_CLODC
crt2; 3-hydroxybutyryl-CoA dehydratase
L2_039_239G1_scaffold_520_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17608..18618)
DNA (1011bp) protein (337aa)
Electron transfer flavoprotein alpha-subunit n=207 Tax=Clostridium difficile RepID=C9XNF1_CLODC
etfA2; electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha-subunit {ECO:0000313|EMBL:CBE03056.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_039_239G1_scaffold_520_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18637..19419)
DNA (783bp) protein (261aa)
Electron transfer flavoprotein beta-subunit n=205 Tax=Clostridium difficile RepID=C9XNF0_CLODC
electron transfer flavoprotein subunit beta
Electron transfer flavoproteins subunit beta {ECO:0000313|EMBL:CCK89850.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L2_039_239G1_scaffold_520_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19478..20614)
DNA (1137bp) protein (379aa)
bcd2; Butyryl-CoA dehydrogenase (EC:1.3.99.-)
Butyryl-CoA dehydrogenase n=185 Tax=Clostridium difficile RepID=Q18AQ1_CLOD6
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EFH14427.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
L2_039_239G1_scaffold_520_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21323..21790)
DNA (468bp) protein (156aa)
YbaK / prolyl-tRNA synthetases associated domain protein n=186 Tax=Clostridium difficile RepID=T3HZT5_CLODC
oligonucleotide binding protein
Putative oligonucleotide binding protein possibly involved in recognition/discrimination or editing of prolyl-tRNA {ECO:0000313|EMBL:CAJ67894.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L2_039_239G1_scaffold_520_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21869..22411)
DNA (543bp) protein (181aa)
Uncharacterized protein n=174 Tax=Clostridium difficile RepID=T3I2Z6_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE67741.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_039_239G1_scaffold_520_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22463..23149)
DNA (687bp) protein (229aa)
ABC-2 transporter family protein n=196 Tax=Clostridium difficile RepID=C9XNE6_CLODC
ABC transporter permease
ABC-2 transporter family protein {ECO:0000313|EMBL:EQE67762.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_039_239G1_scaffold_520_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23149..24009)
DNA (861bp) protein (287aa)
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=122 Tax=Clostridium difficile RepID=T3I231_CLODC
ABC transporter family protein {ECO:0000313|EMBL:EQE67738.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_039_239G1_scaffold_520_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24144..24944
DNA (801bp) protein (267aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=218 Tax=Clostridium difficile RepID=C9XNE4_CLODC
inorganic polyphosphate/ATP-NAD kinase
L2_039_239G1_scaffold_520_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24969..25538
DNA (570bp) protein (190aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Phosphodiesterase, MJ0936 family protein n=199 Tax=Clostridium difficile RepID=C9XNE3_CLODC
phosphodiesterase
L2_039_239G1_scaffold_520_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25915..26967)
DNA (1053bp) protein (351aa)
Cell wall binding repeat 2 family protein n=33 Tax=Clostridium difficile RepID=T2UXT0_CLODI
Cell wall binding repeat 2 family protein {ECO:0000313|EMBL:EQE67770.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
cell surface protein
Displaying items 1-30 of 33 in total

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