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L2_039_239G1_scaffold_710

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_710_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..780)
DNA (780bp) protein (260aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
purK; phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=3 Tax=Bifidobacterium breve RepID=F6C5I9_BIFBA
L2_039_239G1_scaffold_710_2
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(764..1264)
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=3 Tax=Bifidobacterium RepID=E5Y0I3_9BIFI
purE; pure
L2_039_239G1_scaffold_710_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1366..2358)
DNA (993bp) protein (331aa)
NADPH/quinone reductase {ECO:0000313|EMBL:KFI71889.1}; EC=1.1.1.1 {ECO:0000313|EMBL:KFI71889.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
NADPH/quinone reductase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARZ0_BIFLN
qor2; NADPH/quinone reductase
L2_039_239G1_scaffold_710_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2532..4733
DNA (2202bp) protein (734aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Transketolase, pyridine binding domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B812_BIFLN
1-deoxy-D-xylulose-5-phosphate synthase
L2_039_239G1_scaffold_710_5
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4717..6288)
DNA (1572bp) protein (524aa)
Efflux ABC transporter permease protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NF06_9BIFI
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CCY95752.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
saly-type abc antimicrobial peptide transport system permease component
L2_039_239G1_scaffold_710_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6300..7475)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATG0_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ22403.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
s-layer protein
L2_039_239G1_scaffold_710_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7472..8254)
DNA (783bp) protein (261aa)
ABC superfamily ATP binding cassette transporter, ABC protein n=4 Tax=Bifidobacterium longum subsp. longum RepID=D6ZT24_BIFLJ
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIJ22368.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_039_239G1_scaffold_710_8
unknown

Not on your lists

8342..8509
DNA (168bp) protein (56aa)

This feature has no annotations

L2_039_239G1_scaffold_710_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8657..9865
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUN5_BIFLN
Transcriptional regulator {ECO:0000313|EMBL:KFI71894.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Crp/Fnr family transcriptional regulator
L2_039_239G1_scaffold_710_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9952..10821)
DNA (870bp) protein (290aa)
Transcriptional regulator n=3 Tax=Bifidobacterium longum RepID=B3DT71_BIFLD
RpiR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACD98340.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_039_239G1_scaffold_710_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10973..13228
DNA (2256bp) protein (752aa)
Alpha-L-arabinofuranosidase A-like protein {ECO:0000313|EMBL:KFI71896.1}; EC=3.2.1.55 {ECO:0000313|EMBL:KFI71896.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUN7_BIFLN
alpha-L-arabinofuranosidase A-like protein
L2_039_239G1_scaffold_710_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13355..13660
DNA (306bp) protein (102aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=B7GUB1_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70848.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_039_239G1_scaffold_710_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13685..14872)
DNA (1188bp) protein (396aa)
Di-and tricarboxylate transporter n=12 Tax=Bifidobacterium RepID=D6ZT19_BIFLJ
transport protein
Transport protein {ECO:0000313|EMBL:KFI71898.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_039_239G1_scaffold_710_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15174..15296
DNA (123bp) protein (41aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DT76_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95744.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_039_239G1_scaffold_710_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15257..15391)
DNA (135bp) protein (45aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum PF0_BIFLN">RepID=S3DPF0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97957.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_039_239G1_scaffold_710_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15421..16353)
DNA (933bp) protein (311aa)
Asparaginase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT16_BIFLJ
asparaginase
Asparaginase {ECO:0000313|EMBL:ADH00022.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_039_239G1_scaffold_710_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16707..18371)
DNA (1665bp) protein (555aa)
Transcriptional regulator, GntR family n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6D9J9_BIFLN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBK70852.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
transcriptional regulator, GntR family
L2_039_239G1_scaffold_710_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18429..19067)
DNA (639bp) protein (213aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Glutamine amidotransferase subunit PdxT n=3 Tax=Bifidobacterium longum RepID=B3DT79_BIFLD
SNO glutamine amidotransferase
L2_039_239G1_scaffold_710_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19153..20028)
DNA (876bp) protein (292aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Pyridoxal biosynthesis lyase PdxS n=3 Tax=Bifidobacterium RepID=PDXS_BIFLD
pyridoxal biosynthesis lyase PdxS
L2_039_239G1_scaffold_710_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20069..22243)
DNA (2175bp) protein (725aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
DNA primase, catalytic core (EC:2.7.7.-)
DNA primase, catalytic core n=3 Tax=Bifidobacterium longum subsp. longum RepID=D6D9K2_BIFLN
L2_039_239G1_scaffold_710_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22408..23715)
DNA (1308bp) protein (436aa)
HD domain-containing protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XY77_9BIFI
HD domain-containing protein {ECO:0000313|EMBL:EFV37351.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
deoxyguanosinetriphosphate triphosphohydrolase
L2_039_239G1_scaffold_710_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23887..25239)
DNA (1353bp) protein (451aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Alanine racemase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MS79_BIFL1
alanine racemase
L2_039_239G1_scaffold_710_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25548..26015
DNA (468bp) protein (156aa)
Amino acid transporter n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NG03_9BIFI
yfnA; amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:ERI87860.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_039_239G1_scaffold_710_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26012..26641
DNA (630bp) protein (210aa)
Probable amino acid transporter n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G570_BIFLO
yfnA; amino acid transporter
Probable amino acid transporter {ECO:0000313|EMBL:AAN24955.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_039_239G1_scaffold_710_25
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26829..26936)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GTJ1_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20715.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_039_239G1_scaffold_710_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26984..27241)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=Q8G569_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24956.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_039_239G1_scaffold_710_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27540..27956)
DNA (417bp) protein (139aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
S-ribosylhomocysteine lyase n=3 Tax=Bifidobacterium breve RepID=F6C5U1_BIFBA
Autoinducer-2 production protein luxS
L2_039_239G1_scaffold_710_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28056..29855)
DNA (1800bp) protein (600aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KFI71910.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KFI71910.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT06_BIFLJ
ATP-dependent DNA helicase RecQ
L2_039_239G1_scaffold_710_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30014..31738
DNA (1725bp) protein (575aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUQ7_BIFLN
Ykud domain-containing protein {ECO:0000313|EMBL:KFI71911.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_039_239G1_scaffold_710_30
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31877..33061)
DNA (1185bp) protein (395aa)
cystathionine gamma-lyase (EC:2.5.1.48 4.4.1.1)
Cystathionine gamma-lyase n=6 Tax=Bifidobacterium RepID=D6D9L1_BIFLN
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:EFV37358.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Displaying items 1-30 of 44 in total

View Taxonomy