name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L2_039_239G1_scaffold_836_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
1..90
|
tRNA methylthiotransferase YqeV n=2 Tax=Clostridium RepID=B6FJY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23568.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
|
|
L2_039_239G1_scaffold_836_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
148..411
|
UPF0297 protein CLONEX_00429 n=2 Tax=Clostridium RepID=B6FJY7_9CLOT
UPF0297 protein CLONEX_00429 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
|
|
L2_039_239G1_scaffold_836_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
419..850
|
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Putative Holliday junction resolvase n=2 Tax=Clostridium RepID=B6FJY6_9CLOT
conserved hypothetical protein TIGR00250
|
|
L2_039_239G1_scaffold_836_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
877..1137
|
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23571.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Protein of unknown function (DUF1292).
|
|
L2_039_239G1_scaffold_836_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
1165..1632
|
Transcriptional regulator, Fur family n=2 Tax=Clostridium RepID=B6FJY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23572.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Fe2+/Zn2+ uptake regulation proteins
|
|
L2_039_239G1_scaffold_836_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
1652..3316
|
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23573.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
|
|
L2_039_239G1_scaffold_836_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
3389..4039
|
O-methyltransferase n=2 Tax=Clostridium RepID=B6FJY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23574.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted O-methyltransferase
|
|
L2_039_239G1_scaffold_836_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
4043..5269
|
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=2 Tax=Clostridium RepID=B6FJY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23575.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
|
|
L2_039_239G1_scaffold_836_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(5299..5916)
|
RNA polymerase sigma factor n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYQ9_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
RNA polymerase sigma-28 subunit SigK
|
|
L2_039_239G1_scaffold_836_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
6128..7654
|
Mg chelatase-like protein n=2 Tax=Clostridium RepID=B6FJX8_9CLOT
Mg chelatase-like protein {ECO:0000313|EMBL:EEA83672.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Mg chelatase-related protein
|
|
L2_039_239G1_scaffold_836_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
7659..8735
|
DNA protecting protein DprA n=2 Tax=Clostridium RepID=B6FJX7_9CLOT
DNA protecting protein DprA {ECO:0000313|EMBL:EEA83671.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA protecting protein DprA
|
|
L2_039_239G1_scaffold_836_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8762..10846
|
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=2 Tax=Clostridium RepID=B6FJX6_9CLOT
|
|
L2_039_239G1_scaffold_836_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
10967..11749
|
GTP-sensing transcriptional pleiotropic repressor CodY n=2 Tax=Clostridium RepID=B6FJX5_9CLOT
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Pleiotropic transcriptional repressor
|
|
L2_039_239G1_scaffold_836_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
11808..12137
|
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23581.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
|
|
L2_039_239G1_scaffold_836_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
12221..12505
|
10 kDa chaperonin n=2 Tax=Clostridium RepID=B6FJX3_9CLOT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Co-chaperonin GroES (HSP10)
|
|
L2_039_239G1_scaffold_836_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
12533..14155
|
60 kDa chaperonin n=3 Tax=Clostridium RepID=B6FJX2_9CLOT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
chaperonin GroL
|
|
L2_039_239G1_scaffold_836_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14295..14783
|
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23584.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
|
|
L2_039_239G1_scaffold_836_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14926..16233
|
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Clostridium RepID=B6FJX0_9CLOT
|
|
L2_039_239G1_scaffold_836_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
16275..16418
|
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Clostridium RepID=B6FJX0_9CLOT
|
|
L2_039_239G1_scaffold_836_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
16515..17189
|
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium RepID=B6FJV8_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EEA83652.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
N-acetylmuramoyl-L-alanine amidase
|
|
L2_039_239G1_scaffold_836_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
17322..18218
|
Uncharacterized protein n=2 Tax=Clostridium RepID=R6QNT3_9CLOT
Putative CRISPR-associated protein Csc1 {ECO:0000313|EMBL:EEA83651.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
yybE1; HTH-type transcriptional regulator YybE
|
|
L2_039_239G1_scaffold_836_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
18265..19221
|
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase, PfkB family n=2 Tax=Clostridium RepID=B6FJV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23598.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
|
|
L2_039_239G1_scaffold_836_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
19243..19752
|
HAD phosphatase, family IIIA {ECO:0000313|EMBL:EEA83649.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEA83649.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
HAD phosphatase, family IIIA n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJV5_9CLOT
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
|
|
L2_039_239G1_scaffold_836_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
19947..21950
|
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PJ95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23600.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
NADH:flavin oxidoreductase
|
|
L2_039_239G1_scaffold_836_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
22086..22445
|
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23602.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
|
|
L2_039_239G1_scaffold_836_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22471..23355)
|
LysR substrate binding domain protein n=2 Tax=Clostridium RepID=B6FJV1_9CLOT
LysR substrate binding domain protein {ECO:0000313|EMBL:EEA83645.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator, LysR family
|
|
L2_039_239G1_scaffold_836_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
23539..24414
|
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Shikimate dehydrogenase n=2 Tax=Clostridium RepID=B6FJV0_9CLOT
hypothetical protein
|
|
L2_039_239G1_scaffold_836_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
24447..25634
|
Transporter, major facilitator family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJU9_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEA83643.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Major Facilitator Superfamily.
|
|
L2_039_239G1_scaffold_836_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
25660..26421
|
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJU8_9CLOT
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|
L2_039_239G1_scaffold_836_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
26511..27023
|
TRAP transporter, DctQ-like membrane protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJU7_9CLOT
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:EEA83641.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
TRAP-type C4-dicarboxylate transport system, small permease component
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