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L2_039_239G1_scaffold_857

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_857_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1..363)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6E8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35288.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_039_239G1_scaffold_857_2
unknown

Not on your lists

732..857
DNA (126bp) protein (42aa)

This feature has no annotations

L2_039_239G1_scaffold_857_3
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

865..1770
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Mobiluncus curtisii subsp. holmesii ATCC 35242 RepID=E6M5U5_9ACTO
ATPase {ECO:0000313|EMBL:KFI52806.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
putative ATPase
L2_039_239G1_scaffold_857_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1808..2785)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A285_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35287.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_039_239G1_scaffold_857_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2908..3561)
DNA (654bp) protein (218aa)
YheO-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLY8_9ACTN
YheO-like protein {ECO:0000313|EMBL:CDA35286.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_039_239G1_scaffold_857_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3675..3896
DNA (222bp) protein (74aa)
Putative carbamoyltransferase YgeW n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6E3_9ACTN
Putative carbamoyltransferase YgeW {ECO:0000313|EMBL:CDA35283.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_039_239G1_scaffold_857_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3841..4455
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A279_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35282.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
MobA-like protein
L2_039_239G1_scaffold_857_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4524..5261)
DNA (738bp) protein (246aa)
Putative selenium-dependent hydroxylase accessory protein YqeC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA67_9ACTN
Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EBA39390.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_039_239G1_scaffold_857_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5364..5969
DNA (606bp) protein (202aa)
Selenium-dependent molybdenum hydroxylase system protein YqeB family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFA7_9ACTN
Selenium-dependent molybdenum hydroxylase system protein YqeB family {ECO:0000313|EMBL:CDA35279.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
selenium-dependent molybdenum hydroxylase system protein
L2_039_239G1_scaffold_857_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5979..7022
DNA (1044bp) protein (348aa)
Putative xanthine dehydrogenase accessory factor n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6D8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74965.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
putative xanthine dehydrogenase maturation protein
L2_039_239G1_scaffold_857_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


7105..7662
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=2 Tax=Collinsella RepID=A4EA70_9ACTN
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L5
L2_039_239G1_scaffold_857_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


7742..7927
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZLY0_9ACTN
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
30S ribosomal protein S14
L2_039_239G1_scaffold_857_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


8047..8445
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Collinsella RepID=A4EA72_9ACTN
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
30S ribosomal protein S8P
L2_039_239G1_scaffold_857_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


8479..9015
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=2 Tax=Collinsella RepID=A4EA73_9ACTN
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
50S ribosomal protein L6
L2_039_239G1_scaffold_857_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


9091..9459
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=2 Tax=Collinsella RepID=A4EA74_9ACTN
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
50S ribosomal protein L18
L2_039_239G1_scaffold_857_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


9474..9998
DNA (525bp) protein (175aa)
30S ribosomal protein S5 n=1 Tax=Collinsella sp. CAG:166 RepID=R6A268_9ACTN
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
30S ribosomal protein S5P
L2_039_239G1_scaffold_857_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


10001..10183
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=2 Tax=Collinsella RepID=A4EA76_9ACTN
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L30
L2_039_239G1_scaffold_857_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


10187..10636
DNA (450bp) protein (150aa)
50S ribosomal protein L15 n=2 Tax=Collinsella RepID=A4EA77_9ACTN
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
50S ribosomal protein L15
L2_039_239G1_scaffold_857_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


10630..11916
DNA (1287bp) protein (429aa)
Protein translocase subunit SecY n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF97_9ACTN
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
protein translocase subunit secY/sec61 alpha
L2_039_239G1_scaffold_857_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11935..12561
DNA (627bp) protein (209aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA79_9ACTN
L2_039_239G1_scaffold_857_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12558..13346
DNA (789bp) protein (263aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Collinsella RepID=A4EA80_9ACTN
L2_039_239G1_scaffold_857_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13484..13708
DNA (225bp) protein (75aa)
Translation initiation factor IF-1 n=2 Tax=Collinsella RepID=R5ZLX0_9ACTN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
translation initiation factor 1 (bIF-1)
L2_039_239G1_scaffold_857_23
Eggerthella sp. CAG:209, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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13859..13972
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=18 Tax=Bacteria RepID=C7N7V4_SLAHD
LSU ribosomal protein L36P
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1262875 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:209.;"
L2_039_239G1_scaffold_857_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


13987..14361
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=2 Tax=Collinsella RepID=R5ZF94_9ACTN
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
30S ribosomal protein S13P
L2_039_239G1_scaffold_857_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


14376..14780
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=2 Tax=Collinsella RepID=A4EA84_9ACTN
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
30S ribosomal protein S11P
L2_039_239G1_scaffold_857_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


14800..15396
DNA (597bp) protein (199aa)
30S ribosomal protein S4 n=2 Tax=Collinsella RepID=A4EA85_9ACTN
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
30S ribosomal protein S4P
L2_039_239G1_scaffold_857_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15429..16370
DNA (942bp) protein (314aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=2 Tax=Collinsella RepID=A4EA86_9ACTN
L2_039_239G1_scaffold_857_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


16401..16868
DNA (468bp) protein (156aa)
50S ribosomal protein L17 n=2 Tax=Collinsella RepID=A4EA87_9ACTN
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L17P
L2_039_239G1_scaffold_857_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16961..17785
DNA (825bp) protein (275aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
tRNA pseudouridine synthase A n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF92_9ACTN
tRNA pseudouridine synthase A
L2_039_239G1_scaffold_857_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17947..18987
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EA89_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74945.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
family 2 glycosyl transferase
Displaying items 1-30 of 34 in total

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