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L2_039_239G1_scaffold_932

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_932_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1702
DNA (1701bp) protein (567aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CDM2_BIFBR
Polyribonucleotide nucleotidyltransferase
L2_039_239G1_scaffold_932_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2139..2849)
DNA (711bp) protein (237aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CX02_BIFBR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI88598.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATP-binding protein of ABC transporter system
L2_039_239G1_scaffold_932_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2987..3826)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E370_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88597.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein, possibly permease component of ABC transporter
L2_039_239G1_scaffold_932_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4350..4928
DNA (579bp) protein (193aa)
LemA family protein n=2 Tax=Bifidobacterium breve RepID=U2E7X9_BIFBR
LemA protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76692.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_039_239G1_scaffold_932_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4994..7249
DNA (2256bp) protein (752aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVL7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88595.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Conserved hypothetical membrane spanning protein
L2_039_239G1_scaffold_932_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7249..7491
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CDL7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88594.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative membrane spanning protein
L2_039_239G1_scaffold_932_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7606..8640
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CWZ7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88593.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative membrane spanning protein
L2_039_239G1_scaffold_932_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8642..9064
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZK04_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76696.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative membrane spanning protein
L2_039_239G1_scaffold_932_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9367..9537
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E7X4_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI88591.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_039_239G1_scaffold_932_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9692..10555
DNA (864bp) protein (288aa)
Oxidoreductase, aldo/keto reductase family protein n=2 Tax=Bifidobacterium breve RepID=U2CVL1_BIFBR
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERI88590.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Oxidoreductase, aldo/keto reductase family
L2_039_239G1_scaffold_932_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10823..11884
DNA (1062bp) protein (354aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CDL1_BIFBR
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:ERI88589.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Inosine-uridine preferring nucleoside hydrolase
L2_039_239G1_scaffold_932_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11888..12502)
DNA (615bp) protein (205aa)
Ribosome maturation factor RimM n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CWZ2_BIFBR
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
16S rRNA processing protein rimM
L2_039_239G1_scaffold_932_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12525..12758)
DNA (234bp) protein (78aa)
UPF0109 protein Bbr_0380 n=5 Tax=Bifidobacterium breve RepID=F9Y1H8_BIFBU
RNA binding protein
UPF0109 protein BBBR_0319 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_039_239G1_scaffold_932_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12782..13195)
DNA (414bp) protein (138aa)
30S ribosomal protein S16 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E7W9_BIFBR
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
SSU ribosomal protein S16P
L2_039_239G1_scaffold_932_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13342..14673)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVK5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI88585.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative membrane spanning protein
L2_039_239G1_scaffold_932_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14925..16580)
DNA (1656bp) protein (552aa)
Signal recognition particle protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CSD1_BIFBR
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Signal recognition particle, subunit FFH/SRP54
L2_039_239G1_scaffold_932_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16935..17843
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAC0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87439.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
putative membrane spanning protein in cation efflux family
L2_039_239G1_scaffold_932_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18092..19741)
DNA (1650bp) protein (550aa)
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Cysteine--tRNA ligase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1I3_BIFBU
L2_039_239G1_scaffold_932_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19904..20680
DNA (777bp) protein (259aa)
Class I glutamine amidotransferase n=3 Tax=Bifidobacterium breve RepID=F6C7E9_BIFBA
Class I glutamine amidotransferase {ECO:0000313|EMBL:ERI87437.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
class I glutamine amidotransferase
L2_039_239G1_scaffold_932_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20896..23109
DNA (2214bp) protein (738aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4V7_BIFBR
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87436.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATP-binding protein of ABC transporter system
L2_039_239G1_scaffold_932_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23250..23672)
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Ribonuclease VapC n=4 Tax=Bifidobacterium breve RepID=D4BMI4_BIFBR
Plasmid stability protein
L2_039_239G1_scaffold_932_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23682..23960)
DNA (279bp) protein (93aa)
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein n=6 Tax=Bifidobacterium breve RepID=F6C7F2_BIFBA
Hypothetical protein
Plasmid stabilization protein {ECO:0000313|EMBL:BAQ99367.1}; Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:EFE90005.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_039_239G1_scaffold_932_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24128..24685)
DNA (558bp) protein (186aa)
Acetolactate synthase, small subunit n=4 Tax=Bifidobacterium breve RepID=F6C7F3_BIFBA
Acetolactate synthase small subunit
Acetolactate synthase small subunit {ECO:0000313|EMBL:AHJ20596.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_039_239G1_scaffold_932_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24701..26665)
DNA (1965bp) protein (655aa)
ilvB; Acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase large subunit {ECO:0000313|EMBL:ABE95091.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ABE95091.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Acetolactate synthase large subunit n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1I9_BIFBU
L2_039_239G1_scaffold_932_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26825..27568)
DNA (744bp) protein (248aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribonuclease 3 n=6 Tax=Bifidobacterium breve RepID=F6C7F5_BIFBA
L2_039_239G1_scaffold_932_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27741..27935)
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=6 Tax=Bifidobacterium breve RepID=F6C7F6_BIFBA
LSU ribosomal protein L32P
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_039_239G1_scaffold_932_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28025..28645)
DNA (621bp) protein (207aa)
Putative ACR, COG1399 n=2 Tax=Bifidobacterium breve RepID=F6C7F7_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95094.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L2_039_239G1_scaffold_932_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28761..29546)
DNA (786bp) protein (262aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C7F8_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87427.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_039_239G1_scaffold_932_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29552..29902)
DNA (351bp) protein (117aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Phosphopantetheine adenylyltransferase n=6 Tax=Bifidobacterium breve RepID=F6C7F9_BIFBA
Phosphopantetheine adenylyltransferase
L2_039_239G1_scaffold_932_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29859..29996)
DNA (138bp) protein (46aa)
coaD; Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Phosphopantetheine adenylyltransferase n=6 Tax=Bifidobacterium breve RepID=F6C7F9_BIFBA
Displaying items 1-30 of 39 in total

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