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L2_039_239G1_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 161 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_27_1
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..77)
DNA (75bp) protein (25aa)
Transcriptional regulator, AsnC family n=2 Tax=Clostridium RepID=A7VPK3_9CLOT
Transcriptional regulator AsnC family {ECO:0000313|EMBL:CDC04098.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_239G1_scaffold_27_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

245..1588
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPK4_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EDO62666.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
MATE efflux family protein
L2_039_239G1_scaffold_27_3
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1874..4129
DNA (2256bp) protein (752aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPK6_9CLOT
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EDO62668.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L2_039_239G1_scaffold_27_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4292..4585)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO62669.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L2_039_239G1_scaffold_27_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4704..4976
DNA (273bp) protein (91aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridium RepID=A7VPK8_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC04094.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
XRE family transcriptional regulator
L2_039_239G1_scaffold_27_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4940..5113
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MWK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04093.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_239G1_scaffold_27_7
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5106..5804
DNA (699bp) protein (233aa)
Methyltransferase, YaeB family n=2 Tax=Clostridium RepID=A7VPK9_9CLOT
Methyltransferase YaeB family {ECO:0000313|EMBL:CDC04092.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
conserved hypothetical protein TIGR00104
L2_039_239G1_scaffold_27_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5902..6882)
DNA (981bp) protein (327aa)
Oxidoreductase aldo/keto reductase family protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6ND24_9CLOT
Oxidoreductase aldo/keto reductase family protein {ECO:0000313|EMBL:CDC04091.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
L2_039_239G1_scaffold_27_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7335..8546
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MZ62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04090.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_039_239G1_scaffold_27_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8633..9694
DNA (1062bp) protein (354aa)
Sugar-binding domain protein n=2 Tax=Clostridium RepID=A7VPL3_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:CDC04089.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
LacI family transcriptional regulator
L2_039_239G1_scaffold_27_11
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9802..10233
DNA (432bp) protein (144aa)
Fucose dissimilation pathway protein FucU (EC:5.1.3.-)
RbsD/FucU transport family protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MWK2_9CLOT
RbsD/FucU transport family protein {ECO:0000313|EMBL:CDC04088.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_239G1_scaffold_27_12
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10642..12315
DNA (1674bp) protein (558aa)
Putative peptidoglycan binding domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPL5_9CLOT
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EDO62677.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Putative peptidoglycan-binding domain-containing protein
L2_039_239G1_scaffold_27_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12765..13643
DNA (879bp) protein (293aa)
Aldose 1-epimerase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPL9_9CLOT
Aldose 1-epimerase {ECO:0000313|EMBL:EDO62681.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Galactose mutarotase and related enzymes
L2_039_239G1_scaffold_27_14
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13661..14260
DNA (600bp) protein (200aa)
Cupin domain protein n=2 Tax=Clostridium RepID=A7VPM0_9CLOT
Cupin domain protein {ECO:0000313|EMBL:EDO62682.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative transcriptional regulator
L2_039_239G1_scaffold_27_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14253..15899
DNA (1647bp) protein (549aa)
AMP-binding enzyme n=1 Tax=Clostridium leptum CAG:27 RepID=R6N6T6_9CLOT
AMP-binding enzyme {ECO:0000313|EMBL:CDC04084.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
AMP-dependent synthetase and ligase
L2_039_239G1_scaffold_27_16
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16114..16566)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VPM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04083.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_239G1_scaffold_27_17
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16553..16783)
DNA (231bp) protein (77aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridium RepID=A7VPM3_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO62685.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
DNA binding protein
L2_039_239G1_scaffold_27_18
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16974..18671
DNA (1698bp) protein (566aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPM5_9CLOT
L2_039_239G1_scaffold_27_19
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18758..19852)
DNA (1095bp) protein (365aa)
Stage II sporulation protein D n=1 Tax=Clostridium leptum CAG:27 RepID=R6MZ53_9CLOT
Stage II sporulation protein D {ECO:0000313|EMBL:CDC04080.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
stage II sporulation protein D
L2_039_239G1_scaffold_27_20
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20059..21414
DNA (1356bp) protein (452aa)
Citrate synthase n=2 Tax=Clostridium RepID=A7VPM9_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Citrate synthase
L2_039_239G1_scaffold_27_21
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21534..22709
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO62692.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L2_039_239G1_scaffold_27_22
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22874..23893
DNA (1020bp) protein (340aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
GPD1; Glyceraldehyde-3-phosphate dehydrogenase 1 (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPN1_9CLOT
L2_039_239G1_scaffold_27_23
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24355..24894
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VPN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04076.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_039_239G1_scaffold_27_24
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25285..27312
DNA (2028bp) protein (676aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPN6_9CLOT
L2_039_239G1_scaffold_27_25
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27352..28581
DNA (1230bp) protein (410aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=2 Tax=Clostridium RepID=A7VPN7_9CLOT
L2_039_239G1_scaffold_27_26
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28568..29683
DNA (1116bp) protein (372aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=2 Tax=Clostridium RepID=A7VPN8_9CLOT
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CDC04073.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_239G1_scaffold_27_27
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29698..31125
DNA (1428bp) protein (476aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Clostridium leptum CAG:27 RepID=R6P290_9CLOT
L2_039_239G1_scaffold_27_28
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31647..31907)
DNA (261bp) protein (87aa)
30S ribosomal protein S18 n=2 Tax=Clostridium RepID=A7VPP1_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
SSU ribosomal protein S18P
L2_039_239G1_scaffold_27_29
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31944..32396)
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridium RepID=A7VPP2_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
single-strand binding protein
L2_039_239G1_scaffold_27_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32412..32708)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=2 Tax=Clostridium RepID=A7VPP3_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
SSU ribosomal protein S6P
Displaying items 1-30 of 161 in total

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