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L2_039_239G1_scaffold_477

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_477_1
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(130..726)
DNA (597bp) protein (199aa)
Resolvase N-terminal domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6NBC2_9CLOT
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CDC03496.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Resolvase domain protein
L2_039_239G1_scaffold_477_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1079..2452)
DNA (1374bp) protein (458aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium leptum CAG:27 RepID=R6P0N5_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDC03497.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L2_039_239G1_scaffold_477_3
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2455..2793)
DNA (339bp) protein (113aa)
Branched-chain amino acid transport protein (AzlD) n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVD8_9CLOT
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:EDO60938.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Branched-chain amino acid transport protein (AzlD).
L2_039_239G1_scaffold_477_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2793..3533)
DNA (741bp) protein (247aa)
AzlC protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVD7_9CLOT
AzlC protein {ECO:0000313|EMBL:EDO60937.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
AzlC family protein
L2_039_239G1_scaffold_477_5
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3577..4725)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03500.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_039_239G1_scaffold_477_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4988..5164)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VVD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03501.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Domain of Unknown Function (DUF1540).
L2_039_239G1_scaffold_477_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5402..6922)
DNA (1521bp) protein (507aa)
Trypsin n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVD4_9CLOT
Trypsin {ECO:0000313|EMBL:EDO60934.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_039_239G1_scaffold_477_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7673..8779)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MUU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03503.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_039_239G1_scaffold_477_9
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9077..11029
DNA (1953bp) protein (651aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
metG; Methionine-tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVD0_9CLOT
L2_039_239G1_scaffold_477_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11026..11793
DNA (768bp) protein (256aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase TatD family n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXH3_9CLOT
Hydrolase TatD family {ECO:0000313|EMBL:CDC03505.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_239G1_scaffold_477_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11790..12692
DNA (903bp) protein (301aa)
Radical SAM domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVC8_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EDO60928.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
radical SAM protein
L2_039_239G1_scaffold_477_12
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13092..13409
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=2 Tax=Clostridium RepID=A7VVC7_9CLOT
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDO60927.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
putative transcriptional regulator
L2_039_239G1_scaffold_477_13
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13406..13945
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VVC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03508.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_039_239G1_scaffold_477_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14779..17142)
DNA (2364bp) protein (788aa)
Putative stage II sporulation protein E n=1 Tax=Clostridium leptum CAG:27 RepID=R6N5D9_9CLOT
Putative stage II sporulation protein E {ECO:0000313|EMBL:CDC03509.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Stage II sporulation protein E (SpoIIE).
L2_039_239G1_scaffold_477_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17410..18372)
DNA (963bp) protein (321aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXH8_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDC03510.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
beta-lactamase
L2_039_239G1_scaffold_477_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18457..19635)
DNA (1179bp) protein (393aa)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVB9_9CLOT
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:EDO60918.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Polynucleotide adenylyltransferase region
L2_039_239G1_scaffold_477_17
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20170..20865)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MUU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03513.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
scm; collagen-binding MSCRAMM Scm
L2_039_239G1_scaffold_477_18
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20958..21248)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N5E2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03514.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_239G1_scaffold_477_19
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21463..22671)
DNA (1209bp) protein (403aa)
Stage II sporulation protein P n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVB1_9CLOT
Stage II sporulation protein P {ECO:0000313|EMBL:EDO60911.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
stage II sporulation protein P
L2_039_239G1_scaffold_477_20
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22783..23658)
DNA (876bp) protein (292aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
spore protease (EC:3.4.24.78)
Germination protease n=2 Tax=Clostridium RepID=A7VVA9_9CLOT
L2_039_239G1_scaffold_477_21
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23835..24095
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=2 Tax=Clostridium RepID=A7VVA7_9CLOT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
SSU ribosomal protein S20P
L2_039_239G1_scaffold_477_22
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24370..24522
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MUU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC03518.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_239G1_scaffold_477_23
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24968..25336)
DNA (369bp) protein (123aa)
Stage V sporulation protein AE n=2 Tax=Clostridium RepID=R6N5E7_9CLOT
Stage V sporulation protein AE {ECO:0000313|EMBL:CDC03519.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
putative membrane protein
L2_039_239G1_scaffold_477_24
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25433..26011)
DNA (579bp) protein (193aa)
Putative cyclase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVA3_9CLOT
Putative cyclase {ECO:0000313|EMBL:EDO60903.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Predicted metal-dependent hydrolase
L2_039_239G1_scaffold_477_25
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26310..27002)
DNA (693bp) protein (231aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
MTA/SAH nucleosidase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVA1_9CLOT
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
L2_039_239G1_scaffold_477_26
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27326..28816
DNA (1491bp) protein (497aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5 2.7.1.51)
Carbohydrate kinase, FGGY family protein n=2 Tax=Clostridium RepID=A7VV99_9CLOT
Carbohydrate kinase FGGY family protein {ECO:0000313|EMBL:CDC03522.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_039_239G1_scaffold_477_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28915..29550
DNA (636bp) protein (212aa)
Putative L-ribulose-5-phosphate 4-epimerase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VV98_9CLOT
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EDO60898.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
class II aldolase/adducin family protein
L2_039_239G1_scaffold_477_28
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29602..30822
DNA (1221bp) protein (407aa)
ROK family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VV97_9CLOT
ROK family protein {ECO:0000313|EMBL:EDO60897.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
ROK family protein
L2_039_239G1_scaffold_477_29
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31101..31385)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VV94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60894.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L2_039_239G1_scaffold_477_30
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31416..32276)
DNA (861bp) protein (287aa)
AP endonuclease, family 2 n=1 Tax=Clostridium leptum DSM 753 RepID=A7VV93_9CLOT
AP endonuclease, family 2 {ECO:0000313|EMBL:EDO60893.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
D-tagatose 3-epimerase
Displaying items 1-30 of 31 in total

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