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L2_039_239G1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_50_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(135..1922)
DNA (1788bp) protein (596aa)
Putative sensor histidine kinase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPN9_9CLOT
Putative sensor histidine kinase {ECO:0000313|EMBL:CDD37938.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_50_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1936..2667)
DNA (732bp) protein (244aa)
LytTr DNA-binding region n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAK5_9CLOT
LytTr DNA-binding region {ECO:0000313|EMBL:CDD37936.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
LytTr DNA-binding protein
L2_039_239G1_scaffold_50_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2877..3734
DNA (858bp) protein (286aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YVJ6_9CLOT
FKBP-type peptidyl-prolyl cis-trans isomerases 2
L2_039_239G1_scaffold_50_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3993..5084
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37928.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
DNA or RNA helicases of superfamily II
L2_039_239G1_scaffold_50_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5359..5691
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JID2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33574.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L2_039_239G1_scaffold_50_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5804..6463
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43199.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cobyrinic acid a,c-diamide synthase
L2_039_239G1_scaffold_50_7
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6460..7407
DNA (948bp) protein (316aa)
ParB-like partition protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A2U7_9CLOT
ParB-like partition protein {ECO:0000313|EMBL:EMZ22511.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Predicted transcriptional regulators
L2_039_239G1_scaffold_50_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7394..7669
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D3F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90843.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_039_239G1_scaffold_50_9
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7836..8036
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JV12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37928.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_039_239G1_scaffold_50_10
Veillonella sp. DORA_B_18_19_23, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8049..8774
DNA (726bp) protein (242aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1403933 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_B_18_19_23.;"
DNA methylase n=1 Tax=Bacillus cereus H3081.97 RepID=B5V3Q0_BACCE
DNA (cytosine-5-)-methyltransferase
L2_039_239G1_scaffold_50_11
Bacillus sp. CMAA 1185, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8771..9841
DNA (1071bp) protein (357aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1385719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. CMAA 1185.;"
dcm_2; DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Gardnerella vaginalis (strain 409-05) RepID=D2RAE0_GARV4
L2_039_239G1_scaffold_50_12
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9834..11795
DNA (1962bp) protein (654aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Gardnerella vaginalis (strain 409-05) RepID=D2RAE1_GARV4
ATPase family associated with various cellular activities (AAA)
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:ADB13817.1}; TaxID=553190 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis (strain 409-05).;"
L2_039_239G1_scaffold_50_13
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11810..13207
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A1S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ19950.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
LlaJI restriction endonuclease
L2_039_239G1_scaffold_50_14
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13251..14426)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002E78CCC
Uncharacterized protein {ECO:0000313|EMBL:KAJ50631.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hypothetical protein
L2_039_239G1_scaffold_50_15
unknown

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14677..14877
DNA (201bp) protein (67aa)

This feature has no annotations

L2_039_239G1_scaffold_50_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15272..15805
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74408.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
RNA polymerase sigma factor
L2_039_239G1_scaffold_50_17
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15964..16350
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N5N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS78373.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_039_239G1_scaffold_50_18
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16378..17388
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B3E4C5
Uncharacterized protein {ECO:0000313|EMBL:EGG92306.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
phage-associated protein
L2_039_239G1_scaffold_50_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17563..17808
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74407.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_039_239G1_scaffold_50_20
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17765..18103
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TCZ1_HELMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ85442.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
L2_039_239G1_scaffold_50_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18096..18677
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43174.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_039_239G1_scaffold_50_22
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18765..19217
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74973.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L2_039_239G1_scaffold_50_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19233..19802
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74404.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_039_239G1_scaffold_50_24
unknown

Not on your lists

19762..20040
DNA (279bp) protein (93aa)

This feature has no annotations

L2_039_239G1_scaffold_50_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20100..22091
DNA (1992bp) protein (664aa)
DNA-directed DNA polymerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISA1_9CLOT
DNA-directed DNA polymerase {ECO:0000313|EMBL:CCY43169.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DNA-directed DNA polymerase
L2_039_239G1_scaffold_50_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22319..24643
DNA (2325bp) protein (775aa)
Virulence-associated E family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IS96_9CLOT
Virulence-associated E family protein {ECO:0000313|EMBL:CCY43164.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
virulence-associated E family protein
L2_039_239G1_scaffold_50_27
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24893..25204
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IFP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS20646.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_039_239G1_scaffold_50_28
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25201..25482
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IR66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24390.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
VRR-NUC domain.
L2_039_239G1_scaffold_50_29
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25463..26839
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JDS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT26750.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
SNF2-related protein
L2_039_239G1_scaffold_50_30
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26826..27065
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PIC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50315.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
Displaying items 1-30 of 148 in total

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