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L2_039_239G1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_039_239G1_scaffold_244_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(92..1420)
DNA (1329bp) protein (443aa)
Predicted metallopeptidase (DUF2201) n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN92_9CLOT
Predicted metallopeptidase (DUF2201) {ECO:0000313|EMBL:CDD44849.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted metallopeptidase (DUF2201).
L2_039_239G1_scaffold_244_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1424..2440)
DNA (1017bp) protein (339aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFD1_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD44850.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulator
L2_039_239G1_scaffold_244_3
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2563..3633)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CH41_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE11002.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_039_239G1_scaffold_244_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3677..4363)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44876.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Uncharacterized membrane protein, possible Na+ channel or pump
L2_039_239G1_scaffold_244_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4360..4845)
DNA (486bp) protein (162aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Hydrolase NUDIX family n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQQ0_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDD44877.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_244_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4894..6360)
DNA (1467bp) protein (489aa)
Predicted phosphohydrolases n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z943_9CLOT
Predicted phosphohydrolases {ECO:0000313|EMBL:CDD44878.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted phosphohydrolases
L2_039_239G1_scaffold_244_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6403..7554)
DNA (1152bp) protein (384aa)
Cation diffusion facilitator family transporter n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZNC0_9CLOT
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDD44879.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
cation diffusion facilitator family transporter
L2_039_239G1_scaffold_244_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7551..8582)
DNA (1032bp) protein (344aa)
UPF0246 protein CLOM621_08774 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFG9_9CLOT
UPF0246 protein BN593_00301 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_244_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8811..10667)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44881.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_244_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10789..12345)
DNA (1557bp) protein (519aa)
LysM domain n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQQ6_9CLOT
LysM domain {ECO:0000313|EMBL:CDD44882.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
LysM domain.
L2_039_239G1_scaffold_244_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12517..13014)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z948_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44883.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_244_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13051..13923)
DNA (873bp) protein (291aa)
PP-loop family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZNC4_9CLOT
PP-loop family protein {ECO:0000313|EMBL:CDD44884.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L2_039_239G1_scaffold_244_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13904..14599)
DNA (696bp) protein (232aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFH5_9CLOT
L2_039_239G1_scaffold_244_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14836..15207)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44886.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_244_15
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15200..15445)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WX83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77837.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
YcfA-like protein.
L2_039_239G1_scaffold_244_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15614..16147)
DNA (534bp) protein (178aa)
Guanosine polyphosphate pyrophosphohydrolases/synthetases (EC:3.1.7.2)
Guanosine polyphosphate pyrophosphohydrolases/synthetases n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z953_9CLOT
Guanosine polyphosphate pyrophosphohydrolases/synthetases {ECO:0000313|EMBL:CDD44888.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_244_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16152..17060)
DNA (909bp) protein (303aa)
Small-conductance mechanosensitive channel n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZNC9_9CLOT
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CDD44889.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Small-conductance mechanosensitive channel
L2_039_239G1_scaffold_244_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17061..19676)
DNA (2616bp) protein (872aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFI1_9CLOT
L2_039_239G1_scaffold_244_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19861..20484
DNA (624bp) protein (208aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Signal peptidase I . Serine peptidase. MEROPS family S26A n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUY6_9CLOT
L2_039_239G1_scaffold_244_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20564..21883
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Aspartokinase n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQR5_9CLOT
aspartate kinase
L2_039_239G1_scaffold_244_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22021..22581
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z957_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44893.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_244_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22562..22999)
DNA (438bp) protein (146aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZND3_9CLOT
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CDD44894.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_244_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23195..24142)
DNA (948bp) protein (316aa)
Uncharacterized domain HDIG n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFI8_9CLOT
Uncharacterized domain HDIG {ECO:0000313|EMBL:CDD44895.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
uncharacterized domain HDIG
L2_039_239G1_scaffold_244_24
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24203..25525)
DNA (1323bp) protein (441aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CH14_9CLOT
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:EFE10975.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_039_239G1_scaffold_244_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26231..26734)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZND8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44899.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_039_239G1_scaffold_244_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26802..27209)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44900.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_244_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27213..27413)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZUZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44901.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_244_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27415..27873)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AQS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44902.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_244_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27896..28231)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z968_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44903.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_039_239G1_scaffold_244_30
unknown

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comp(28231..28536)
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying items 1-30 of 53 in total

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